KEGG   Sphingobium sp. EP60837: EP837_01278
Entry
EP837_01278       CDS       T04432                                 
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sphb  Sphingobium sp. EP60837
Pathway
sphb03030  DNA replication
sphb03430  Mismatch repair
sphb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sphb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EP837_01278 (dnaQ)
   03430 Mismatch repair
    EP837_01278 (dnaQ)
   03440 Homologous recombination
    EP837_01278 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphb03032]
    EP837_01278 (dnaQ)
   03400 DNA repair and recombination proteins [BR:sphb03400]
    EP837_01278 (dnaQ)
Enzymes [BR:sphb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EP837_01278 (dnaQ)
DNA replication proteins [BR:sphb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EP837_01278 (dnaQ)
DNA repair and recombination proteins [BR:sphb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EP837_01278 (dnaQ)
SSDB
Motif
Pfam: RNase_T DUF5710 RNase_H_2
Other DBs
NCBI-ProteinID: ANI77707
UniProt: A0A173KV39
Position
1:complement(1309238..1310071)
AA seq 277 aa
MNMHPDYRVQRRLVPVTHFHEVNPLTSGRIGVVIDVETTGLDRETDCIIELAVQRFRFDD
RGRIVQVGLPRVWREDPGIPIDPKITKLTGLAVDDVAGQAIDEEMAVEILSSADIIIAHN
AAFDRPFIDRRLPAIADKPWACSMAELDWLELGFEGRALAHLVAQCGWFYEGHRAENDIL
ALLYLLSHGLSDGTTILSKLIECSERPTYRVNAIDAPFDAKDRLKARGYRWDAAMRFWWK
SVGQDESDVERAWLNSDVYAGYGEPAFIPVTACERHR
NT seq 834 nt   +upstreamnt  +downstreamnt
ttgaacatgcatcctgattaccgcgtgcagcgccgccttgttcctgtcacccacttccat
gaggtgaatccgctaacgtccggtcggatcggcgtggtaatcgatgtggagacgaccggt
ctcgatcgcgaaaccgattgcatcatcgagttggctgtgcagcgcttccggttcgatgat
cgtgggcggatcgtacaggtagggttgccgcgggtgtggcgtgaagatcccggcatcccg
atcgatccgaagatcaccaaacttaccggcctcgcagtagacgacgttgccggccaggca
attgacgaagagatggctgtggaaattctttcgtccgccgacatcatcattgctcacaat
gccgcgttcgacaggccgtttattgatcggcgtctgccggccattgccgacaagccctgg
gcctgctcgatggctgaactggattggcttgagctcgggttcgaggggcgtgccctcgcg
catctcgtcgcgcaatgcggttggttctatgaagggcacagggccgaaaacgatattctt
gcgcttctgtatctgctctcccacggattatccgacggaacgacgatcctgtcgaagctc
atcgagtgctcagaacggccgacatatcgggtgaatgccatcgatgcgccttttgatgcc
aaggatcggttgaaggcacggggctatcgctgggacgcagccatgcgtttctggtggaag
agcgtcggccaggacgagagtgatgtcgaacgcgcctggctgaatagcgatgtctatgct
ggatatggtgagccagcattcatccccgtaacggcctgcgaacggcatcgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system