KEGG T03542: SKP52

Sphingopyxis fribergensis: SKP52_17600

Entry

SKP52_17600       CDS       T03542

Symbol

nusA

Name

(GenBank) transcription elongation factor NusA

K02600

transcription termination/antitermination protein NusA

Organism

sphk Sphingopyxis fribergensis

Brite

KEGG Orthology (KO) [BR:sphk00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sphk03021]
    SKP52_17600 (nusA)
   03009 Ribosome biogenesis [BR:sphk03009]
    SKP52_17600 (nusA)
Transcription machinery [BR:sphk03021]
Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     SKP52_17600 (nusA)
Ribosome biogenesis [BR:sphk03009]
Prokaryotic type
  rRNA transcription factors
   SKP52_17600 (nusA)

SSDB

Motif

Pfam:

NusA_N KH_5 S1 HHH_5 KH_1 KH_2

Other DBs

NCBI-ProteinID:

AJA10391

UniProt:

A0A0A7PJT9

Position

complement(3725888..3727537)

AA seq 549 aa
MATAISANKAELLAIANSVASEKMIDKGIVIEAIEEAIQRAARARYGAENDIRAKLDAQT
GDLRLWRVVEVVEQVEDYFKQVDLAAGQKLQKDAKIGDFIVDPLPAVDLGRIDAQSAKQV
IFQKVREADRERQYQEFKDRAGEIITGVVKSVEFGHIVVNLGRAEGVIRRDQQIPRELMR
VGDRVRALILSVRSETRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISYDGSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPATVQ
RVVIDEDDSRIEVVVPDDQLSLAIGRRGQNVRLASQLTGSQIDIMTEADASEKRQREFVE
RSTMFQEELDVDETLAQLLVAEGFTELEEVAYVGIEELAGIEGFDEELAQELQSRALEGL
ERREEASRAERRELGVEDALADIPHLTEAMLVVLGKAGIKTLDDLADLATDELIAKKRTD
NRRGPPRSERAEDKGGVLGEYGLSEEQGNEIIMAARAHWFDDEPSDAAPEAEPAVEPQNG
EAADADPAQ

NT seq 1650 nt +upstreamnt +downstreamnt
atggccactgccatttccgccaacaaggccgaactcctcgcgattgccaacagcgtcgcc
agcgagaagatgatcgacaagggcatcgtcatcgaggccatcgaggaggcgatccagcgc
gccgcgcgcgcccgctacggcgccgaaaacgacattcgcgcgaagctggacgcccagacc
ggcgacctgcgcctgtggcgcgtcgtcgaggtcgtcgagcaggtcgaggattatttcaag
caggtcgacctggctgccggccagaagcttcagaaggacgccaagatcggcgacttcatc
gtcgatccgctgcccgcggtcgacctcggccgcattgatgcgcagtcggcaaagcaggtg
atcttccagaaggtccgcgaagccgatcgcgagcgccagtatcaggaattcaaggatcgc
gcgggtgagatcatcaccggcgtcgtgaagtcggtcgaattcggccacatcgtcgtgaac
ctaggccgcgccgagggcgtcatccgccgcgaccagcagatcccgcgcgaattgatgcgc
gtcggcgaccgcgtccgcgcgctgatcctgtcggtgcgcagcgaaacgcgcggcccgcag
attttcctgtcgcgcgcgcaccccgacttcatgaagaaactgttcgcgcaggaagtcccc
gaaatctacgacggcatcatcgagatcaaggccgctgcgcgcgatcccggttcgcgcgcc
aagatcggcgtcatcagctatgacggttcgatcgatcccgtcggcgcctgcgtcggcatg
aagggcagccgcgtccaggcggtcgtccaggaaatgcagggcgaaaagatcgacatcatc
ccctggtccgaagataccgcgaccttcgtcgtcaacgcgctccagccggcaacggtccag
cgcgtcgtcatcgacgaggatgacagccgcatcgaagtcgtcgttcccgacgaccagctc
agcctcgccatcggccgccgcggccagaatgtccgcctcgcgagccagctgaccggcagc
cagatcgacatcatgaccgaggccgacgcgagcgaaaagcgccagcgtgaattcgtcgaa
cgctcgacgatgttccaggaagaactcgacgtcgacgaaacgctcgcgcagctgctcgtc
gccgaaggcttcaccgaactcgaagaagtcgcctatgtcggcatcgaggaactcgccggg
atcgaagggtttgacgaagaactggcgcaggaactgcaaagccgcgcgctcgaaggcttg
gaacgccgcgaagaagcctcgcgcgccgagcgccgcgagctgggggtcgaggacgcgctg
gccgatatcccgcacctgaccgaagcgatgctggtggtgctgggcaaggcggggatcaag
acgctcgatgacctggccgacctggcgaccgacgaactgatcgccaagaagcgcaccgac
aaccgccgcggcccgccgcgcagcgaacgcgccgaggacaagggcggcgtgctgggcgaa
tatggcctgagcgaagaacagggtaacgagatcatcatggcggcgcgcgcccactggttc
gacgacgaaccgtcggacgctgcgcctgaagctgagcccgcggttgagccgcaaaacggg
gaggccgccgatgcggaccccgcacaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system