KEGG T04670: BV902

Sphingobacterium sp. B29: BV902_15830

Entry

BV902_15830       CDS       T04670

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

sphn Sphingobacterium sp. B29

Brite

KEGG Orthology (KO) [BR:sphn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sphn03032]
    BV902_15830
   03400 DNA repair and recombination proteins [BR:sphn03400]
    BV902_15830
Enzymes [BR:sphn01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BV902_15830
DNA replication proteins [BR:sphn03032]
Prokaryotic type
  DNA Topoisomerases
   BV902_15830
DNA repair and recombination proteins [BR:sphn03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BV902_15830

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C DAO_C

Other DBs

NCBI-ProteinID:

APU97622

Position

3742296..3744860

AA seq 854 aa
MAEETENDNNLVPANDRIIPINIEDQMKSAYIDYSMSVIVSRALPDARDGMKPVHRRVLY
GMLDLGVTSGKPYKKSARIVGDVLGKYHPHGDSSVYDTMVRMAQDWSLRYPLVDGQGNYG
SIDGDPPAAMRYTEARLKKIAEEMLSDINKDTVDFQNNFDDSLQEPTVLPTRIPNLLVNG
ASGIAVGMATNMAPHNLSEVIDGTIAFIDNRDIEVPELMQHIKGPDFPTGALIYGYAGVQ
DACNTGRGRIVMRAKAEIEATKSGREQIIVTEIPYQVNKANMIERTAELVNEKKLEGISA
IRDESDRTGMRIVYDIKRDANANVVLNNLFKYTALQTSFSVNNIALVKGRPMLLNLKDMI
HEFVEHRHDVIVRRTRYELAEAEKRAHILEGYLIALDHLDEVIKLIRNSDTPEDARVGLM
EKFGLSDLQARAILDMTLRRLTGLERDKIKEEYAELMKTIDYLKSILEDEELRMKIIKDE
LIEIKEKYGDERRSQIVHSAEDMRMEDFIDDEEIVITISHNSYVKRTPLSEYKRQGRGGR
GSIGTNTREEDFTEHIITASAHNYMLLFTEAGRCFWLRAFEIPEGSRTSRGRALQNIINV
PKEEKIKAFILVKNLKDQEYLENNFIIMCTKKGTIKKTSLEAYSRPRANGINAININEGD
QLIEACLTTGSSEIVMALRSGRAIRFNESTVRPMGRTATGVRGITLGAESDEVIGMISVN
DSETTVLVVSEKGYGKRTDIEDYRVTNRGGKGVKTINVTDKTGELVAIKGVTDNEDLMII
NKSGIVIRIAVEELRVMGRATQGVRLINLKDNDEIASITKVDREEESEEESEMTEESTEN
GDSTSEENTDSNEE

NT seq 2565 nt +upstreamnt +downstreamnt
atggctgaagaaacagaaaacgacaacaatcttgttccggcaaacgaccggattatccca
atcaacatcgaggatcagatgaagtctgcctacattgactattccatgtctgtcattgta
tcaagagcacttcctgatgcccgtgatggcatgaaaccagtacacagacgtgttctttat
ggcatgctggacttaggggttaccagtggcaagccttacaaaaagtctgcccgtatcgtt
ggtgacgtattaggtaaatatcacccacatggtgattcgtccgtttatgacaccatggtt
cgtatggctcaagattggagtttacgctaccctttggtagatggtcaaggtaactacggt
tccattgatggcgatccacctgcggcgatgcgttacactgaggcaagattaaagaaaatt
gccgaggaaatgctatccgatatcaacaaagacactgttgatttccaaaataactttgac
gattccttacaagaaccaacagtccttcctacgcgtattccaaacctcctggtaaatgga
gcttcgggtattgctgtaggtatggctacaaatatggctccacataacctatctgaggtt
atcgatggtacaatcgcttttattgataatcgtgatattgaggttccagaattgatgcag
cacatcaaaggcccagacttccctacaggtgcattgatctacggctatgccggggttcaa
gatgcttgtaatacgggacgtggccgtattgtcatgcgtgcaaaagctgaaatagaagca
accaagtctggaagagagcagattattgttaccgaaatcccctatcaggtgaacaaggcg
aatatgatcgagcgtacagccgaactggttaatgagaagaaactagaaggtatctctgcc
atccgtgatgaatctgatcgtacgggtatgcgtattgtgtacgacatcaaacgtgatgca
aatgcaaatgttgttttaaacaatttgtttaaatatacagcgctacaaacttcattttca
gtaaacaatattgctttagttaaaggaaggccaatgctgttgaatctgaaagatatgatt
catgagtttgtggagcatagacatgatgtaatcgttagacgtacacgctatgaactggca
gaagctgaaaaacgtgctcatattctagaagggtatttaattgccctagatcatttggat
gaagtcatcaaattgatccgtaactcggatacaccagaagatgcacgcgttggattaatg
gaaaaatttggactgtccgaccttcaggctcgcgcgatcctcgatatgaccttacgtcgt
ctaacaggactggaacgtgataagattaaagaggaatatgctgaattgatgaaaacaatt
gactatttgaaatcgatattggaagacgaagagcttcgtatgaaaattatcaaagacgag
ttgattgaaatcaaggaaaaatatggcgacgaacgtagatctcagattgtacactctgct
gaagatatgcgtatggaagattttattgatgatgaggaaatcgttatcacaatctcccac
aatagttacgtaaaacgtactccattatccgaatacaaacgccaaggccgcggtggtcgt
ggatcaattggcacaaacacacgcgaagaagattttaccgagcatatcatcacagcctca
gcacataactatatgctgctatttacagaggcaggtcgctgtttctggttgcgtgcattt
gagattcctgaaggaagccgtacttctagaggtcgagcgcttcaaaatatcatcaatgtt
ccaaaagaagaaaaaatcaaggccttcatcctggtgaagaacttgaaggaccaagaatat
ttggaaaacaacttcattattatgtgtaccaaaaaaggtacgattaagaagacgtcgttg
gaagcctattctcgtccaagagcaaacggtatcaatgccatcaatattaatgaaggcgat
caattaattgaagcttgtttgactactggaagcagtgaaattgtcatggctctccgttct
ggtcgagcaattcgtttcaatgaatctacagttcgtccaatgggcagaacagcaacaggt
gtacgtggtatcaccttgggagctgaaagtgatgaagtgattggcatgattagtgtgaat
gattcggaaactaccgtgttggtcgtttctgaaaaaggatacggaaaacggacagatatc
gaagattatcgcgtaacgaatcgtggtggtaaaggtgtgaaaacaatcaacgttacagat
aaaacaggcgaactcgttgcgataaaaggcgttacagacaacgaagatttaatgatcatc
aacaagtctggtattgttatccgtattgctgtggaagaattaagagtaatgggacgtgcg
acacaaggtgtaagactcattaatttaaaagataacgacgagatcgcttctattacgaaa
gtcgatcgtgaagaagaatctgaagaagagtctgaaatgaccgaagagtcaacggaaaat
ggcgattcgacttctgaagaaaacacggactcaaacgaagaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system