KEGG T04670: BV902

Sphingobacterium sp. B29: BV902_18425

Entry

BV902_18425       CDS       T04670

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

sphn Sphingobacterium sp. B29

Brite

KEGG Orthology (KO) [BR:sphn00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphn03400]
    BV902_18425
Enzymes [BR:sphn01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     BV902_18425
DNA repair and recombination proteins [BR:sphn03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    BV902_18425
Prokaryotic type
    BV902_18425

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

APU98068

Position

complement(4298462..4299760)

AA seq 432 aa
MEKDKIIVFWFRRDLRLNDNAGLTRALASGYPVLPIFIFDEDILMQLEDKKDRRLHYIHQ
ALIRINTILGESGATLNTFYGKPITIFRELIEKFDVQGIYCNRDYEPKAIRRDKEIFELC
TAMGIPFKAVKDQVIFDKGDILKNDGTPYTVYTPYAKKWREKLRPEDHLSYTCTTGFFFQ
QNHQQIISLADLGFLETDLIFEEPELNATIIDHYDTTRDYPALMGTTKLGIALRFGTISV
RRCVTFALKHNATWLSELIWREFFMQILYHYPHVVTESFRKQYDAIQWRNDEVEFQQWCN
GDTGYPLVDAGMRQLNSSGYMHNRVRMVAASFLCKHLLIDWRWGEAYFAQKLNDYDLSAN
NGNWQWAAGSGCDAAPYFRVFNPTLQAEKFDKNQEYIKQWVPELDTSDYCEPIVDHQFAR
DRAIKTYAKALK

NT seq 1299 nt +upstreamnt +downstreamnt
atggaaaaagataaaattattgtgttttggtttcgtcgggatctacgtctgaatgataat
gctgggcttactcgcgccttagcttcgggctatcctgtattacctatattcatatttgac
gaggatattctaatgcaattggaggataaaaaagatcgacgtcttcattacatccatcag
gctttaatccgtatcaataccatactcggagaaagcggtgcaactttgaatacgttctac
ggtaaacctattactatcttcagggagctgattgaaaaatttgatgtgcagggaatctat
tgtaatcgggattatgaaccgaaagcaattcgtcgggacaaagagattttcgagctttgt
acagctatgggaattcctttcaaagctgtgaaagatcaggttattttcgataaaggagat
attttaaagaacgatggaacaccctatacggtttatacgccgtatgcaaaaaaatggcgg
gagaaattacgtcctgaggaccatctttcctatacctgcacaacgggatttttctttcag
caaaaccatcagcagattatttctttggcggacttggggtttctggaaactgaccttatt
tttgaagaaccagagctgaatgcgacgattattgaccattatgataccacccgcgattat
ccggcattaatgggtacaaccaaattggggattgcacttcgctttggaacaatcagtgtt
cgtcgatgtgttacttttgctttaaaacacaatgcgacctggttgtctgaattgatctgg
cgtgaattttttatgcagatcctctaccattatccgcatgttgttacggaatcttttaga
aagcaatacgatgccatacaatggcgcaatgacgaggtagaattccagcaatggtgcaac
ggagacactggatatcctttggtagatgcgggtatgcgccaattgaatagttcgggttat
atgcacaatcgcgtacgaatggtcgcagccagttttctctgtaagcaccttttgatcgac
tggagatggggagaggcctactttgcacaaaagctaaatgattatgatctctcggccaac
aatggtaactggcagtgggccgccggtagtggttgtgacgcagccccgtactttagggtt
tttaatccgacgcttcaggctgagaagttcgataaaaatcaggaatatataaaacaatgg
gttcctgaattagacacttcagactattgtgagcctattgttgaccatcagtttgcccgt
gatcgcgcgataaagacctacgcaaaggcgttgaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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