KEGG   Spirosoma pollinicola: CWM47_34130
Entry
CWM47_34130       CDS       T05236                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
spir  Spirosoma pollinicola
Brite
KEGG Orthology (KO) [BR:spir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spir03032]
    CWM47_34130 (topA)
   03400 DNA repair and recombination proteins [BR:spir03400]
    CWM47_34130 (topA)
Enzymes [BR:spir01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CWM47_34130 (topA)
DNA replication proteins [BR:spir03032]
 Prokaryotic type
  DNA Topoisomerases
   CWM47_34130 (topA)
DNA repair and recombination proteins [BR:spir03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CWM47_34130 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim DUF1773 SAS4
Other DBs
NCBI-ProteinID: AUD06439
UniProt: A0A2K8Z9D5
Position
complement(8074635..8076842)
AA seq 735 aa
MPVKKLLIVESPNKCKKISSILDKLYGAGVWKVVASVGHFRDLPLKSLGVHRDQGYGLSY
ELHPDKLKIVKDIKGLAQQVGIANCYLATDLDREGESISFHLAQILGIPISQTKRVTFDE
VTEKAIAAAVSNPRVLDMKLVSAQEGRRAIDRLTGYEISPLMSRKLGNRLSAGRVQSVAL
RLVVERERTIEAFKSKSDFRLKGEFLTPNGEGIKATYHQPFLTEEAIVSYLKASVQKTYS
VASIDVKPLVRQPSPPFTTSTLQQDAIRKLSKKAGRWSAKKVMEVAQELFAKGHITYMRT
DSPNLSQEAVEAIKEQVNTRLGASYFEARTFKAKQAAQEAHEAIRPTHFDHQQAGDTPDE
QALYELIYRRAMASQMKPALFEQTTIFITSADPQDLFTAVAKVEKFNGYLAVYDEETDEE
GEEETTSLKKIAKGDKLRCQKLIGRQTYSQPAKRYDEASLVRELEKRDIGRPSTYASIVG
TIQARDYVRTDSIPASKLPSVIFTLENNKLEKKVEQQTVGGDQSKLVPSSVGHQVTEYLE
ANFSKLVDYAFTASMEKRLDEVAGGKATYKQVVSEFDTDHQHLLQLADASQHDVVRTPSM
LEVGELNGEPVKTGKGKYGTYVLYKGEFLDARQYEPDQITLDLVVQLLEKKNQQLPQRHE
NLIHKVGKYEVRQGPHGQYVTDGKTNARLPHQITTTEQIKQLTSENCQAILNSYQTWKKS
QAGGKSQPKQVAKKG
NT seq 2208 nt   +upstreamnt  +downstreamnt
gtgcccgtgaaaaaactgctaattgttgaatcgccgaataaatgtaaaaagatcagttcc
attctcgacaaactctacggagctggcgtttggaaagtcgtcgcttcggtgggtcacttt
cgggatctgcccctcaaatcattgggcgtccatcgggaccagggatatggcctgagctat
gagctgcatcctgataaactgaagatcgttaaggacatcaaaggcctggctcagcaggtc
gggattgccaactgttatctggcaacggatttggaccgggaaggagagtctatatcattc
cacttagctcaaatcctcggtattccgatttcccagaccaagcgggtgaccttcgacgaa
gtcaccgaaaaagcgattgcagcagctgtttcaaacccgcgggtactggatatgaaactg
gtaagtgcccaggaggggcgccgggcaatagatcggttgacaggctacgagatttcacca
ctcatgagccgcaagctaggcaaccggctaagtgctggccgggtccaatcggtagccctg
cgtttagttgtggaacgcgagcgaaccatcgaagcttttaaatcaaaatcggatttcaga
cttaagggggaattcctgacaccaaatggtgaagggatcaaggcaacctaccatcaaccg
tttctgacggaagaagctattgtttcgtacttaaaagcctccgtacagaaaacgtattcc
gtggccagcattgacgtaaaaccattggtgcgtcaacccagtccaccttttaccacctcc
accctgcaacaggatgcaatccggaagctcagtaagaaagcgggacgctggtcagccaaa
aaagtaatggaggttgctcaggagttatttgccaaagggcatatcacgtatatgcgtacg
gattctcctaatttatcgcaggaagccgtcgaggccattaaagaacaggtgaatacccgt
ttaggcgcatcctattttgaggcaagaaccttcaaggccaagcaagctgcacaagaggct
cacgaagccattcgaccaactcactttgaccatcaacaagctggtgatacgccggatgaa
caggcgctttacgaactgatatatcgtcgggctatggcttcccagatgaaaccggccttg
tttgaacagactacgatattcatcacctcagctgatccacaggatttatttacggccgta
gccaaagtggaaaagttcaatggatacctagccgtttatgacgaagaaaccgatgaagaa
ggggaagaagaaacaacatccctgaaaaaaattgccaaaggagataaactacgctgtcag
aaactcattggccgacaaacctacagccaacccgccaaacggtatgatgaggccagtctg
gttcgtgagctggaaaaacgggacattgggcgcccatctacgtacgccagcattgttggt
acaattcaggctcgtgattacgtgcgtactgattctatcccagcctcaaagttgccatca
gttatttttaccctggaaaataataaactggaaaaaaaagtagagcaacaaaccgttggc
ggtgatcaaagcaaattagtcccgagttcagtgggccatcaggtaactgaatatctggaa
gctaatttcagcaaactggtcgattacgcgttcacggcttccatggaaaagcgtctggat
gaagttgccggtggaaaagctacttataaacaagtagtgagtgagtttgatacggatcat
cagcatttgctgcagttagcggatgcatctcagcacgacgtcgtccgaactccatcgatg
cttgaagttggagaacttaatggagaacccgtaaaaaccggcaaggggaagtacggtact
tacgtcctgtataaaggggaattcctggatgcacgccagtatgaaccagatcaaattacg
ctggacctggtcgtacaattactggaaaagaaaaaccagcagctcccgcaacgtcatgaa
aatttgattcacaaagtaggaaagtatgaagtccgtcagggtccacatggccagtacgtg
actgatggtaagaccaatgcccgtttacctcatcaaattaccaccaccgagcagatcaag
caactgacaagcgaaaactgccaggcaatactaaatagctatcaaacctggaaaaaatcg
caggcaggaggcaagagccaaccaaaacaagttgccaaaaaaggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system