KEGG   Sphingomonas sp. KC8: KC8_02155
Entry
KC8_02155         CDS       T04987                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
spkc  Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:spkc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:spkc02048]
    KC8_02155
Enzymes [BR:spkc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KC8_02155
Prokaryotic defense system [BR:spkc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KC8_02155
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII DEAD DUF6363 DUF2385 DUF3818 FIST
Other DBs
NCBI-ProteinID: ARS26093
UniProt: A0A1X9YB90
Position
complement(423071..426205)
AA seq 1044 aa
MAISLTGIVASEDGIVEKPALALLRGLGWQHVDLHGEQPGTANPTGRTSFQQAYFPAHLK
AALHRLNPALPAEALAQAETELTRDRSAMLPVAANREVLSLIRNGVPVQVRRDDGKFDDL
LVRVIDWRDITANHFLVASQVWIAGVLHRRRPDTIGFVNGLPLLLAEWKGPACPLADAYD
NNLRDYRDTIGHLFPANGFVILSNGLEAVMGAAHAPYEVFAPWKRLEEDGPDDPGLETLL
RATCEPARFLDLIESFVLFDEARGGLRKIVGKYHQVLGVNRAIEAVRHIESNQGRLGVFW
HTQGSGKSLSMVMFAEKVLRRLGGNYTFVIVTDRTELDDQIAGQFASAGALTKDIHQAQA
GSRAHLKELLAGNERYVFSLIQKFSTADREPMPVLSERSDIIVMTDEAHRSQYDQLAANM
RAALPNASFIGFTGTPLIQGEESRTREVFGDYVSVYDFAQSVRDGATVPLFYEARKPELQ
LHSDEFREEMDALLDEAMLDEEQEKKLSQQFGRQYTLITSPDRLDKVAEDVALHFAMRGY
RGKAMFVAIDKATAVAMHDRVKAAVARLIAQDEERLKTAHEAEGAAIAERLMWLRELDMA
VVVSQSQNEIDDLRKKGLDILPHRERMQREDLEAKFKDPDDPLRLVFVCAMWITGFDVPT
IGTVYLDKPMKNHTLMQTIARANRRAEGKTSGVIVDYVGVFQNLQKALAIYAGGGGEETP
IKDKEALVATLEDALGSARAFVQPLGIDPDAIIAVRNFDRLRLINQAVEMLIAPDERRRE
FLRLTAAVTKAYKALLPDERAAPYLRPVAVFHTLSDAVKAKLGPVDISAISARIAELLDE
KLEGVAILTPIVEGDTAKGRVDLSGIDFDKLADLFAASPKVTAEKLRDEAEDKARKMAEA
NPTRQHLVERLEKLVADYNAGSVDAEQFFEALKAFIGEMDEEEQRAAREELTEEELAIFD
LLTNPEPKLTKAEEQDVKRVARSLLEKLRDLTGAIDWVRGQETRGAVWTEIRQRLNELPE
NPYPQALWDSKVEQVWDFVLRRYT
NT seq 3135 nt   +upstreamnt  +downstreamnt
atggccatctcactgaccggtatcgtcgcatcagaggatggcattgtcgaaaagccagcc
ctcgccctgttgcggggactgggctggcagcatgtcgatctgcatggcgagcagccgggg
actgcgaaccccaccgggcgcaccagctttcaacaagcgtatttccctgcgcatctgaag
gcggcgctgcacaggctgaacccggccctgccagccgaagcccttgcccaagccgaaacg
gaactgacccgcgaccgttcggccatgctgccggtcgccgccaatcgcgaagtgctgtcg
ctgatccgcaatggcgttccggttcaggtgcggcgagatgacggcaaatttgacgatctg
ctggtgcgggtgatcgactggcgggacataaccgccaatcacttccttgtcgccagtcag
gtctggatcgccggggttctgcatcggcgtcggcccgacaccatcggcttcgtcaacggg
ttgccgctgctgctggcggaatggaaaggccccgcctgtccgctggcggacgcctacgac
aacaacctgcgtgattaccgcgacaccatcgggcacctgttcccggccaatggcttcgtg
atcctgtcgaacgggctggaggcggtgatgggcgcggcccatgccccctacgaagtgttc
gcgccgtggaagcggttggaggaggacgggccggacgatcccggccttgaaaccctactg
cgcgccacctgcgaacctgcccgcttcctcgatctgatcgagagtttcgtgctgttcgac
gaggcacgcgggggcctgcgcaagatcgtcggcaaatatcatcaggtgctgggcgtcaac
cgcgccatcgaggccgtccgccatatcgagagcaatcaggggcggctgggcgtgttctgg
cacacgcaagggtccggcaagagcctgtcgatggtgatgttcgcggaaaaggtgctgcgg
cggctgggcgggaattacaccttcgttatcgttaccgaccgcactgaattggacgaccag
attgccgggcaattcgcatcggcgggcgcgctcaccaaagatattcatcaggcgcaggcg
ggcagccgcgcccatctgaaagaattgctggcgggcaatgaacgctatgtgttcagcctg
atccagaagttcagcacggcggacagagaacccatgccggtgctgtccgaacgatccgac
attatcgtgatgaccgacgaggcgcaccgcagccagtatgaccagcttgccgccaatatg
cgggcggcgctgcccaatgcgtcgttcatcggctttaccggcaccccgctgatacagggc
gaggaaagccgcacccgcgaggtgttcggcgattacgtctccgtctatgatttcgcccag
tccgtgagggatggcgcgaccgtccccctgttctacgaggcgagaaagccggagttgcag
cttcattccgacgagtttcgggaggagatggacgcgctgctggacgaggcgatgctggac
gaggagcaggaaaagaagctcagccagcaattcgggcggcaatacaccctcatcacttcg
cccgaccggctggacaaagtggccgaggacgtggcgctgcacttcgccatgcggggctat
cgcggcaaggcgatgttcgtcgccatcgacaaggcaaccgccgtcgccatgcacgacagg
gtcaaggccgcagtcgcccggctgatcgcacaggacgaggaacggctgaagaccgcccat
gaagcagagggcgcggccatcgccgaacggctgatgtggctgcgcgaactcgatatggcg
gtggtggtcagccagagccagaacgagatcgacgaccttcgcaagaagggcctcgacatc
ctgccgcaccgcgaacggatgcagcgagaggatttggaggcaaagttcaaagaccccgat
gatccgctgcggctggtgttcgtctgcgccatgtggatcaccggcttcgacgtgcccacc
atcggcaccgtctatctcgacaagccgatgaaaaaccacacgctgatgcagaccattgcc
cgcgccaaccgccgggccgagggcaagacatcgggcgtgatcgtcgattatgtcggcgtg
tttcagaacctccagaaggcgctcgccatctatgcgggcggcgggggcgaggaaacgccg
atcaaggacaaggaggcgcttgtcgccacccttgaagatgcgctgggatcggcacgggcg
ttcgtccagccactgggcatcgacccggacgccatcatagcggtgcgcaattttgaccgg
ctgcggctcatcaatcaggccgtggaaatgctgatcgcgcccgatgagcgccgccgcgag
ttcctgcgcctgaccgccgccgtgaccaaggcttacaaggcactgctgccggatgagcgg
gccgcgccttatctgaggccggttgcggtgttccacaccctgtccgacgcggtgaaggcc
aaactggggccggtcgatatatccgccatctccgcccgcatcgccgaactgctcgacgaa
aagctggaaggcgtcgcgatcctgacgcccatcgttgagggcgacaccgccaaggggcgc
gtggacctctccggcatcgactttgacaagctggccgatcttttcgccgccagcccgaaa
gtcaccgccgaaaagctgcgcgatgaggcagaggacaaggcccggaaaatggccgaggcc
aatcccacccggcaacatctggtggagcggctggaaaagctggttgccgattacaacgcc
ggttcggtcgatgccgaacaattcttcgaggcgctgaaggcgttcatcggggaaatggac
gaggaggagcagcgcgctgcccgcgaggaactgaccgaagaggaactggcaatcttcgat
ctgctgacgaacccggaacccaaactcaccaaggcggaggagcaggacgtcaagcgggtg
gctcggtccctgctggagaagttacgcgacctgaccggcgcgatagactgggttcgcgga
caggaaacgcggggcgcggtctggacagagatcaggcagcgcctcaacgaactgccggaa
aatccctatccgcaagcattgtgggacagcaaggtggaacaggtctgggatttcgtattg
cggcggtacacttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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