KEGG   Sphingomonas sp. LK11: AV944_14280
Entry
AV944_14280       CDS       T04954                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
splk  Sphingomonas sp. LK11
Pathway
splk03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:splk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AV944_14280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:splk03400]
    AV944_14280
Enzymes [BR:splk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AV944_14280
DNA repair and recombination proteins [BR:splk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AV944_14280
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: APX66796
Position
complement(3110400..3111173)
AA seq 257 aa
MKITTYNVNGIKARLPRLLEYLAEADADIVCLQELKASDETFPIKDIEAAGYGAVWHGQK
SWNGVAVLARGAQPVERQRGLAGEDEDEHSRYLECEVNGLVVASLYLPNGNPQPGPKFDY
KLRWMERLASRARALLAEEVPAVLAGDYNVIPHDDDTFSVPAMASDALMQPESRQAYRRL
LAQGWTDSLRTRAPKGGVWTFWDYQAGSWQRDAGFRIDHLLLSPQAADRLVDAGVDKSYR
GREKASDHAPTWVKLRD
NT seq 774 nt   +upstreamnt  +downstreamnt
gtgaagatcaccacttacaacgtcaacgggatcaaggcccgtctgccccgcctgctcgaa
tatctggccgaagcggatgcggatatcgtttgtcttcaggaactgaaggccagcgatgag
acctttccgatcaaggacatagaggccgccggatatggggcggtctggcacgggcagaag
agctggaacggcgtcgcggtcctcgcgcgcggtgcccagccggtcgagcggcagcgcggg
ctggcgggcgaggatgaggacgaacatagccgctacctcgaatgcgaggtgaacggtctg
gtcgtcgcctcgctctatctgcccaatggcaatccccagccggggccgaaattcgattac
aagctgcgctggatggaacggctggcgagccgcgcgcgggcgttgctcgcggaggaagtg
cccgccgtgctagccggggactataacgtcatcccccatgacgacgacaccttctccgtc
cccgccatggcgagcgacgcgctgatgcagccggaaagccgtcaggcctatcgccggttg
ctggcgcaagggtggacggactcgctacggacgcgcgcgcccaagggcggggtatggacc
ttctgggactatcaggccgggtcgtggcagcgtgatgcggggttccgtatcgaccatttg
ctgctcagcccgcaggccgccgaccggctggtcgatgcgggcgtcgacaagagctatcgc
ggccgggaaaaggcgagcgaccatgccccgacctgggtgaagttgcgcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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