KEGG   Sphingomonas sp. LM7: BXU08_09665
Entry
BXU08_09665       CDS       T04824                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
splm  Sphingomonas sp. LM7
Pathway
splm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:splm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BXU08_09665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:splm03400]
    BXU08_09665
DNA repair and recombination proteins [BR:splm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BXU08_09665
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR GIY-YIG HHH_2 HHH
Other DBs
NCBI-ProteinID: AQR73878
UniProt: A0A1S6FK14
Position
complement(2124900..2126822)
AA seq 640 aa
MSDPNSPNRFNEEKATYAVRGEGAPDLDAGVAAIRNVVKTLPVRPGVYRMHDARGDVLYV
GKARALKNRVTNYTQVMRLSKRLQRMVAQTRSMTIVTTNNEAEALLLEAQLIKRYRPPYN
VLLRDDKSFPFILLRQDHAFARVQLHRGARRYKGDYFGPFAGAGQVRQTLNALQKLFLLR
SCTDGFFATRDRPCLLYQIRRCSAPCVGRIDEAAYAELVSDARDFLQGKKTQVQAKLGEQ
MQAAAENLDFELAAILRDRLKALTFIQGSQAINAEGVGDADIFALAHKSGVMGIQAFFIR
GGQNWGHRSFFPAHTNDVPEDEVLSQFLMQFYEEVPPPRTIFVDRNLEEAKLLSEALAER
AGHKVALGVPQRGPRRRLLEQAQRNAVEALDRRMAESTTQAKLLAEVADLFELPEPPERI
EVYDNSHIQGTSALGAMVVAGPEGFQKGQYRKFNMKRPETIAGDDYGMMREMFGRRFARA
QDEDPDRQGGTWPDLVLIDGGRGQLNAVKGVLEDLGIEDVCLVGVAKGPHHGRDGREVFH
LMDGRELMLPVNSPVLFFLQRLRDEVHRFAIGAHRDKRSKAIGASPLDEVPGIGPARKKA
LLMHFGTARAVRGASLEDLQKAPGVSAAVAQQVHDFYHAR
NT seq 1923 nt   +upstreamnt  +downstreamnt
atgtccgaccccaattcccccaaccgattcaacgaggaaaaggcgacctatgccgtgcgc
ggcgagggagcgcccgatctcgacgcaggcgtggcggcgatccgcaacgtcgtgaagacg
ctgccggtgcggccgggcgtgtaccggatgcatgatgcgcgcggcgacgtgctctatgtc
ggcaaggcgcgcgcgctcaagaaccgggtgactaattatacccaggtcatgcggctctcg
aagcgtctccagcggatggtggcgcagacgcgctcgatgacgatcgtcaccaccaacaac
gaggccgaggcgctgctgctcgaggcgcagctgatcaagcgctatcgcccgccgtacaac
gtgctgctgcgcgacgataagtcgttcccgtttatccttttgcgccaggaccacgccttc
gcgcgcgtacagctccatcgcggcgcgcggcgctacaagggcgactatttcgggccgttc
gcgggggcggggcaggtgcgtcagacgctcaacgcgctgcagaaattgttcctgttgcgg
agctgcaccgacggcttctttgcgacgcgcgaccggccgtgcctgctgtatcagatccgc
cggtgttcggcgccgtgcgttggccgcatcgacgaggcggcctatgccgagctggtcagc
gatgcgcgcgacttcctccagggcaagaagacccaagtccaggccaagctcggcgagcag
atgcaggccgcggcggagaatctggatttcgagctggccgcgatcctgcgcgaccggctg
aaggcgctcaccttcatccagggcagccaggcgatcaacgccgagggggtcggcgacgcc
gacatcttcgcgctggcgcacaagtccggcgtgatgggcatccaggcgttcttcatccgc
ggcgggcagaattgggggcatcgcagcttcttccctgcgcacaccaatgacgtgcccgag
gacgaagtgctcagccagttcctgatgcaattctatgaggaagtgccgccgccgcggacg
atcttcgtcgatcgcaatctggaggaagccaagctgctgagcgaagcgctggccgagcgc
gccgggcacaaggtggcgctgggggtgccgcagcgcgggccgcggcgccggctgctcgaa
caggcgcagcgcaacgccgtcgaggcgctcgaccggcggatggccgagagcacgacgcag
gccaagctgctcgccgaggtcgccgacctgttcgagctgcccgaaccgcccgagcggatc
gaagtctatgacaacagccatatccaggggacgagcgcgctgggcgcgatggtcgttgcc
gggcccgagggcttccagaagggccagtaccgcaagttcaacatgaagcgtcccgagacg
atcgccggcgacgactacggcatgatgcgcgagatgttcgggcggcgcttcgcacgggcg
caggacgaggatcccgatcgccagggcggcacgtggcccgatctggtgctgatcgacggc
gggcgtggccagctcaacgccgtgaagggcgtgcttgaggatctgggcatcgaggatgtg
tgcctggtcggcgtcgcgaagggcccgcatcatggccgcgacggacgcgaagtgtttcac
ctgatggacgggcgcgagctgatgctgccggtcaattcgccggtgctgttcttcctccag
cggctgcgcgacgaagtccaccgcttcgcgatcggcgcgcaccgcgacaagcgcagcaag
gcgatcggcgcgagcccgctcgacgaagtccccgggatcggcccggcgcgcaagaaggcg
ctgctgatgcatttcggcaccgcgcgcgcggtgcgcggggcgagccttgaggatttgcaa
aaggcgccgggcgtgtcggcggcggtggcccagcaggtgcacgacttctaccacgcgcgt
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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