KEGG   Serratia inhibens: Q5A_000675
Entry
Q5A_000675        CDS       T04576                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
sply  Serratia inhibens
Pathway
sply03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sply00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Q5A_000675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sply03021]
    Q5A_000675
   03019 Messenger RNA biogenesis [BR:sply03019]
    Q5A_000675
Transcription machinery [BR:sply03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Q5A_000675
Messenger RNA biogenesis [BR:sply03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Q5A_000675
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 OB_RNB AAA_25 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ANS40654
UniProt: A0A1B1KJP2
Position
156467..157726
AA seq 419 aa
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDSVSGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaaccttgcccgtatgcgcaagcaggacattatcttctccatccttaag
cagcatgcgaaaagtggagaagatatcttcggcgatggcgtgttggagatattgcaggat
ggatttggtttcctccgctctggagacagttcctaccttgcaggccccgacgacatctac
gtatcccctagccaaatccgccgtttcaacctccgtacaggtgactccgtttccggtaag
attcgtccgccaaaagaaggcgagcgctattttgccctgttgaaagttaatgaagtcaac
tacgacaaaccggaaaacgcccgcagcaagatcctgttcgagaacttgaccccgctgcat
gccaactcccgtctgcggatggaacgtggcaacggttcaaccgaagacctgacggcgcgc
gtgctggacctggcttctccgattggccgtggccagcgtggcctgattgttgctccaccg
aaagccggtaaaaccatgctgctgcagaacattgcgcagagcatcgcctacaaccatcca
gactgcgtgttgatggtgctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgtctggtgaagggtgaagtcatcgcctctacctttgacgagccggcttcccgtcacgtc
caggttgcggaaatggtgatcgagaaggccaagcgcctggttgagcacaagaaagacgtt
atcatccttcttgactccatcacccgtttggcacgtgcctacaacaccgttgtgcctgcc
tccggtaaagtgctgaccggtggtgtggacgccaacgccctgcatcgtcctaagcgtttc
ttcggtgcggcacgtaacgttgaggagggcggtagcctgaccatcatcgctactgcgctg
gtagataccggttccaaaatggacgaggttatctacgaagagtttaaaggtaccggcaac
atggaattgcacctggcgcgtaaaatcgccgagaagcgcgtattccctgcgatcgactac
aatcgctccggtacccgtaaagaagagttactcaccacgtctgaagaactgcaaaaaatg
tggatcctgcgtaaaatcattcacccaatgggcgagattgatgcgatggagttcctcatt
aacaagttggccatgaccaagaccaatgatgaattcttcgatatgatgaagcgctcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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