KEGG   Schizosaccharomyces pombe (fission yeast): SPAC1006.07
Entry
SPAC1006.07       CDS       T00076                                 
Name
(RefSeq) putative translation initiation factor eIF4A
  KO
K03257  translation initiation factor 4A
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPAC1006.07
   03012 Translation factors [BR:spo03012]
    SPAC1006.07
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spo04147]
    SPAC1006.07
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     SPAC1006.07
   mRNA cycle factors
    Stress granule specific factors
     SPAC1006.07
Translation factors [BR:spo03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    SPAC1006.07
Exosome [BR:spo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SPAC1006.07
  Exosomal proteins of bladder cancer cells
   SPAC1006.07
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 fragilysinNterm UvrD-helicase Flavi_DEAD Fanconi_A
Other DBs
NCBI-GeneID: 2542948
NCBI-ProteinID: NP_594854
PomBase: SPAC1006.07
Ensembl: SPAC1006.07
UniProt: P47943
Position
I:5085486..5087031
AA seq 392 aa
MVDQLEDSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVL
AQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHA
CIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKD
QIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVE
KEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTL
MHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSIN
FVTNDDVRMMREIEQFYNTHIEEMPMNIADLI
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggtagaccaactggaggattcggttattgaaaccaactacgatgaggttattgacacc
ttcgacgacatgaatttgaagcctgagcttctccgtggtatttatgcctacggttttgag
cgtccttctgccattcagcaaagagccattatgcccattttgggagagcgtgatgtcctt
gctcaagctcaatctggtactggtaagactgctaccttctcaatttctgttttgcagaag
attgacactagcttgaagcaatgccaagctcttatccttgctcctacccgtgagcttgct
caacaaatccaaaaggttgttgttgctttaggcgatctcatgaatgttgaatgccatgct
tgtattggtggtactcttgttcgtgatgatatggctgccttgcaagctggtgttcacgtt
gttgttggtacaccaggtcgtgttcacgacatgattcaacgtcgtgctcttcctaccgat
gccgtccaaatgtttgttcttgatgaggctgatgaaatgttgtcccgtggtttcaaggac
caaatttacgacattttccaacttttgcctcctactgctcaagttgttcttctttctgcc
accatgcctcaagatgttttggaagtcaccaccaaatttatgcgtgatcccattcgtatc
cttgttaagaaagatgagcttaccttggaaggtatcaagcaattctatgttgccgttgaa
aaggaagagtggaagcttgacactctttgcgatctttatgaaaccgtcactgttactcaa
gccgttattttctgtaatacccgtagaaaggtcgattggcttaccgagcagctcactgag
cgtgattttaccgtctcctccatgcacggtgatatggaccaagctcaacgtgatactttg
atgcatgagttccgtactggttcttctcgtattcttatcaccaccgatcttcttgctcgt
ggtatcgatgtccaacaagtctccttggttatcaactatgacttacctgctaacagagaa
aactacattcaccgtattggtcgtggtggtcgtttcggtcgtaagggtgtttccattaac
tttgttaccaacgacgatgttcgcatgatgcgtgagattgaacaattctacaatacacac
attgaggaaatgcctatgaacattgctgacttgatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (83)   

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