KEGG   Schizosaccharomyces pombe (fission yeast): SPAC10F6.02c
Entry
SPAC10F6.02c      CDS       T00076                                 
Symbol
prp22
Name
(RefSeq) ATP-dependent RNA helicase Prp22
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAC10F6.02c (prp22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spo03041]
    SPAC10F6.02c (prp22)
Enzymes [BR:spo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     SPAC10F6.02c (prp22)
Spliceosome [BR:spo03041]
 Complex C
  Other components
   Step II factors
    SPAC10F6.02c (prp22)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 ABC_tran AAA_19 nSTAND3 AAA_30 SRP54 T2SSE DUF6317 TsaE PhoH Flavi_DEAD EDC4_C AAA_16
Other DBs
NCBI-GeneID: 2542978
NCBI-ProteinID: NP_593253
PomBase: SPAC10F6.02c
Ensembl: SPAC10F6.02c
UniProt: O42643
Position
I:complement(1206812..1210630)
AA seq 1168 aa
MDDLKELEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFT
DSFLQNISRLIKEIKPKDDIPTDNVNNGSNSVNGASHDLDSKDVDKQHQRKMFPGLSIPN
STNNLRDRPALMDNAMDELEELSTLAKTRRNDRDSRRDERHYLNGIRERRERSISPSFSH
HSRTSISGQSHSSRSSRGPLLNAPTLYGIYSGVVSGIKDFGAFVTLDGFRKRTDGLVHIS
NIQLNGRLDHPSEAVSYGQPVFVKVIRIDESAKRISLSMKEVNQVTGEDLNPDQVSRSTK
KGSGANAIPLSAQNSEIGHVNPLETFTSNGRKRLTSPEIWELQQLAASGAISATDIPELN
DGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSLKLSPIKVVKAPDGSLSRAAMQ
GQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSE
TPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKT
TQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSR
MTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLI
VTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPG
DILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRK
VVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRT
GPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTM
IAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSV
PNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRR
AEDVRKQLIRLMDRYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPV
YMHPSGVLFGKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTK
KNLKVLPLYNRFEKPDEWRISKQRKGGR
NT seq 3507 nt   +upstreamnt  +downstreamnt
atggacgatctgaaagaattggagtatttatccttggtatctaaagttgcctctgaaatt
cgaaatcatactggaattgacgataatactcttgcagaatttattattaatttgcatgat
cagtctaagaattacgatgagtttaaaaataatgtcctttcatgtggaggagaattcacc
gacagtttccttcaaaacataagtcgattaattaaggaaattaagcctaaagatgacatt
cccactgataatgtaaataatggtagtaactcggtcaatggagcttcgcatgatttagat
agcaaagatgttgacaaacaacaccaaagaaagatgtttcctggcttaagcatcccaaat
agcacgaataatttaagggatagaccagcgcttatggataatgctatggacgagctggaa
gaactttcgacgttggccaaaacaaggagaaacgatagggattctaggagggatgagcgg
cattacctcaatggaataagggaacgtagagagagatcaattagtcccagtttttcgcat
cattcacgtacctcaatttctggtcaatcacattctagtcgatcatcgcgtggtccattg
ctaaatgctccaacattgtatggaatttattctggtgttgtctcaggtattaaggacttt
ggtgcctttgtaactttggacggctttagaaagagaactgatggtttggttcatatctca
aatatccaattaaatgggagattggatcatccttcagaggctgttagctatggacaacct
gtatttgtaaaagttattagaattgatgaatcagcaaagcgaatcagcctgtcaatgaag
gaggtgaatcaagttacaggtgaggatttgaatccggatcaagtttcacgttctacaaag
aagggtagtggagcaaacgctattccattatcagcccaaaattctgaaattggacatgtg
aatccacttgaaacgttcacttcaaacggtcggaagcgtttaacatcacctgaaatatgg
gagttacagcaacttgctgcatccggtgcaatttccgctacggatattcctgaactcaac
gatggattcaatactaataatgctgcggaaattaatcccgaagatgatgaagacgtagaa
atcgaacttcgtgaagaagaacctggatttctcgcaggacaaaccaaagtttcattaaag
ctatctcctataaaagttgtaaaggccccggatggttcattgtccagagcagcaatgcaa
gggcagattttagcaaatgatagacgagaaataagacaaaaggaggcaaaattaaagagt
gaacaagaaatggaaaagcaagacttatccctctcatggcaagacactatgtcgaatcct
caggatcggaaatttgcccaagatgtgcgagactcagctgctcgtcaacttacttctgaa
actcccagctggcgtcaagcaacacgaaatgcaaatatatcctacggtaaaagaacaaca
ctgagcatgaaagagcaaagagagggtcttccagtttttaaacttcgtaaacagtttctc
gaggctgtctcaaaaaaccaaattttggttctactcggtgaaaccggttccggtaagacc
actcaaatcactcaatatcttgctgaagaaggttataccagtgatagcaaaatgataggt
tgtactcaacctaggcgtgtagctgcaatgtctgttgccaaacgtgtagcagaagaagtg
ggatgtcgtgttggtgaagaggttggttacactattcgtttcgaagataagaccagtaga
atgacccaaattaaatatatgactgatggtatgcttcaacgagaatgtttagttgatcct
cttttgtccaaatattctgtaattattttagatgaagcacatgaaagaaccgttgcaact
gatgtactttttggactgttaaagggaactgttttgaaacggccagatttaaagctaatt
gttacttcagccacgctagatgctgagcggttttcgtcttatttctataaatgcccaatt
tttacgattcctgggcgttcatatcccgtcgaaatcatgtatacaaaacaaccagaagcc
gactatcttgatgctgctttgatgactgttatgcaaatccacttgagcgaaggacctggt
gatatattagtatttctgacaggtcaagaagaaattgatactagttgtgaaatattatat
gaaagaagtaaaatgctaggagattcgattcctgagctagttattttacctgtttattca
gcgcttccttcggaaatacaaagtcgtatttttgaacctgctcccccaggaggtcgtaag
gtagtaattgcaaccaacattgctgaaactagtttaacaattgatggaatttattatgtg
gtggaccctgggtttgtcaagcagagctgctttgatccaaaactaggcatggattctcta
atagttacgccaatttctcaagcacaagctaggcaaagaagtggtcgtgcagggcgtaca
ggacccggaaaatgttatcgtctgtatactgaaagcgcttaccgaaacgaaatgttgcct
tccccgattcctgagatacaacgccaaaatttgtcgcatactattttgatgttaaaggca
atgggaattaacgaccttttgaattttgattttatggatcctccacctgctcaaaccatg
atagccgccttgcaaaatctgtatgcactgtcggccttggacgatgagggattgctgact
cctcttgggcgaaaaatggcagatttcccgatggagcctcaattgtcaaaagtattgatt
actagcgtagaattaggttgctctgaagaaatgttgagtattattgccatgcttagcgta
cctaacatttggagccgaccaagggagaagcagcaagaagctgatcgacaacgagcacaa
tttgcaaatcctgagagtgatcacttaaccttacttaatgtgtatacgacttggaaaatg
aatcgttgctcagataattggtgttatgaacattatatccaagcccgtggtatgcgtcga
gctgaagatgtacgcaaacagcttattcgcctaatggatcggtatcgacacccagttgtt
tcatgtggaagaaagagagaacttattttacgggctttgtgttctggctactttaccaat
gttgccaagcgagactctcacgagggatgttacaaaacgatcgtggagaatgctcctgta
tacatgcatcctagtggagttttatttggaaaagctgcagagtgggtgatataccatgaa
ctgattcaaacgtcaaaagaatacatgcacacggtaagcacagtgaatccaaaatggctt
gtggaagttgcaccaacattctttaaatttgccaatgcaaatcaagtttccaaaaccaag
aaaaatctcaaggtgctaccattgtacaatcgatttgaaaaacccgatgagtggaggatt
tcaaagcaacgaaagggaggtcgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (68)   

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