KEGG   Schizosaccharomyces pombe (fission yeast): SPAC22G7.10
Entry
SPAC22G7.10       CDS       T00076                                 
Name
(RefSeq) fip1-like pre-mRNA polyadenylation factor
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPAC22G7.10
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPAC22G7.10
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SPAC22G7.10
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-GeneID: 2541873
NCBI-ProteinID: NP_593059
PomBase: SPAC22G7.10
Ensembl: SPAC22G7.10
UniProt: Q09801
Position
I:753624..755676
AA seq 344 aa
MSNADQHMDVDEDEYLYGETIEERNDGVTVSNAKSPEQASEESDDSDIEFIIETKPGERA
EPLGGSIATLGSTRPSAKPQVEKTAVEVKTTEPQDLSTAETAPKVDIDAVPTIDGKNIFE
IDLESFDDKPWRKPGADISDYFNYGFDEFTWAAYCAKQTTLRDDFSPQKFMASLAQIPGP
LPSGNVPSPAEFQAMMASGFPPFMPIPPPIGGPQEDMGYSRNFPVHASSNYNTTHTSGGG
VHSGAATPNAYVNNNPSSSRRESESPANSPNITSSAGMTHAQPTHNPTSSYGNGASTNYN
ASRPPSNHPHSSNYPSSSRRKPSPDRYSNYSSRGSGGRYRRNRY
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtcaaatgctgatcagcacatggatgttgatgaggatgaatatttatatggagaaacc
atagaggaacggaatgatggagttacagtgtcaaatgccaagtcaccagagcaagcaagt
gaagaaagcgatgattcagatattgaatttatcattgaaacaaagccaggtgaaagagca
gaaccattaggtggatcgattgcaacattaggttcaacccgaccttctgctaaacctcaa
gtagagaaaactgctgtcgaagtaaaaactacagaaccccaagatttatcgacagcagaa
actgcacctaaagttgacattgacgctgttcctacaattgatggtaaaaacatttttgag
attgatttggagtcttttgatgataaaccatggcgcaagcctggtgcagatatctcagat
tattttaactatggatttgatgaatttacatgggctgcttactgtgccaaacaaacgact
ttgcgtgacgactttagcccccaaaaatttatggcaagtcttgctcagatcccgggtcct
ttaccttctggcaacgtaccatcacctgccgagtttcaagctatgatggcttctggattt
cctccatttatgcctattcctccgcctattggaggcccacaagaggatatggggtactcg
cgcaattttccagtccatgcatcttcaaactataatactacacatacatctggtggtggt
gttcattcaggtgcagctacacctaatgcgtatgtaaataacaatccttcatcttctaga
cgtgaaagtgaaagtccagcgaattcccctaatattacatcgagtgctggtatgacgcat
gcacaacctactcataatcctacatcgagttatgggaatggagcctctacgaactataat
gcctcaagacctcctagtaaccatcctcacagtagcaactatccttcctcatcaaggcga
aaaccatctccggacagatactccaactactcctctagaggttctggcggccgatatcga
cgcaacagatattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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