KEGG   Schizosaccharomyces pombe (fission yeast): SPAC2C4.03c
Entry
SPAC2C4.03c       CDS       T00076                                 
Symbol
smd2
Name
(RefSeq) Sm snRNP core protein Smd2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAC2C4.03c (smd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spo03041]
    SPAC2C4.03c (smd2)
   03032 DNA replication proteins [BR:spo03032]
    SPAC2C4.03c (smd2)
Spliceosome [BR:spo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    SPAC2C4.03c (smd2)
  U2 snRNP components
    SPAC2C4.03c (smd2)
 Complex B
  U1 snRNP components
    SPAC2C4.03c (smd2)
  U4/U6.U5 tri-snRNP components
    SPAC2C4.03c (smd2)
 Complex C
  U2 snRNP components
    SPAC2C4.03c (smd2)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     SPAC2C4.03c (smd2)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 2542480
NCBI-ProteinID: NP_594506
PomBase: SPAC2C4.03c
Ensembl: SPAC2C4.03c
UniProt: O14036
Structure
Position
I:complement(4263953..4264621)
AA seq 115 aa
MADLVDKPRSELSEIELARLEEYEFSAGPLSVLQQAVKNHDQVLINCRNNKKLLARVKAF
DRHSNMVLENVKEMWTEKKRTASGKKGKAINKDRFISKMFLRGDGVVLVVRIPSA
NT seq 348 nt   +upstreamnt  +downstreamnt
atggccgatttggttgataaacctagaagtgaactgagcgaaatagaactcgctcgtcta
gaagaatatgaattctctgctggtccattaagtgttttacaacaagcggtaaaaaatcat
gatcaagttcttattaattgtcgaaacaataaaaagttgcttgctagagtaaaggcattt
gatcgccattccaacatggtattagaaaatgtcaaagagatgtggaccgaaaaaaaacga
acagcttctggcaaaaaaggaaaggctatcaacaaagatagatttattagcaaaatgttt
cttcgtggtgatggtgtcgttcttgttgtccgtattccctctgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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