KEGG   Schizosaccharomyces pombe (fission yeast): SPAC2C4.07c
Entry
SPAC2C4.07c       CDS       T00076                                 
Name
(RefSeq) putative ribonuclease II family protein
  KO
K18758  DIS3-like exonuclease 2 [EC:3.1.13.-]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPAC2C4.07c
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SPAC2C4.07c
SSDB
Motif
Pfam: RNB OB_Dis3 Rrp44_CSD1 Dis3l2_C_term
Other DBs
NCBI-GeneID: 2542643
NCBI-ProteinID: NP_594510
PomBase: SPAC2C4.07c
UniProt: O14040
Structure
Position
I:complement(4270892..4274158)
AA seq 927 aa
MDLKPNIRRKEKRNLLKGEAALEKKGSIDRKTKNKAYPSTTHDPHQNDDSNIPGLGSGLL
ERIKDIVQRPTDTQLKGQDSNHKKASLTETKTEKAKVKPKAKKKNSKEKISKSSKQDEHK
TDVHKESVSKLSKNLESRNNRDENSAKREKNNSHQVEADTNNATEMVSSNAKKSVYPLYY
DSATVKKGLKSGTLFKGTLRILENHRSAFACMEDIPDFYVDGPIARNRAFHNDVVIVEPV
MNNDSPTEKSNFLQNGVEKVKIKDHDDELGGAMEHLERLEIKSVASFKGDSRTRARVVAI
EKRAEISKIVGILRAPGWSLKNVEYVSKKSSYAIFIPKDKRLPFITIHKNDLSDLSGENW
IENILKHHDQLFSVEITRWSIYSRYPMGVLGEKLGNITDVEAYTNALLLENGISSSPFSD
EVLNCLPPDDWIISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRALDNGTYEVGVHI
ADVTHFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSLNPNVERLAFSVFWKL
DSNGKEIGKRWFGKTVIKTCARLAYSEAQGVIEGKSWDDAVGKPIGGTHTPKDVETSILT
LCEISRKLRKDRFAKGAVEINSTELKFQLDEYGMPNKCEVYEQTDANHLIEEFMLLANRS
VAEHISKNFSNNSLLRRHASPKEKQINEFCHFLKSMNFDFDASSSAAFNASMVRLRSTFN
EELVELFENMAVRSLNRAEYFCTGDFGEKTDWHHYALSFNHYTHFTSPIRRYPDIIVHRL
LERSLKNTSPGIDKKNCSLVAAHCNEKKEKSTTVQEDSQQLFLSVYIAEYCKKHDKKSMP
VQAFATRISGNSIDVYISEYGISNRVDLSSDDRIKSFIVAPDDSSVKITLFDDSQKTIAL
TDRFQVYLYSDYSRTFFSIRCSLVSLN
NT seq 2784 nt   +upstreamnt  +downstreamnt
atggatttaaaaccaaatattagaagaaaggaaaagcgaaatttattaaagggagaagct
gctttagaaaaaaaaggctctattgatagaaagacaaaaaataaagcatatccgtctact
actcacgatcctcatcaaaatgatgattccaacattcctggattaggaagtggactattg
gaaaggatcaaagatattgttcaaaggccaacagatacccaattaaaaggtcaagattcg
aaccataagaaagccagcttgactgaaacgaagaccgagaaagccaaggttaaaccgaag
gcaaagaagaaaaactcgaaggaaaaaatctctaaaagttctaagcaggatgaacataaa
accgacgtgcataaagaaagtgtctcgaaactttccaagaatttggagtccagaaataat
cgagatgaaaattccgcgaaacgagaaaaaaacaattctcatcaagttgaagcagatacg
aataacgccactgagatggtatcatccaatgcgaaaaagtcagtatacccgttgtactac
gactctgcaacggttaaaaaaggattaaaaagtggtacattatttaaaggaacgcttcgt
attcttgaaaatcatcgtagcgcttttgcttgtatggaagatatacctgatttttatgtt
gatgggccaattgctagaaatcgtgcttttcacaacgacgttgtaattgtggaacctgtg
atgaataatgacagccccactgaaaaatcgaattttttacagaatggtgtcgagaaagtc
aaaataaaagatcatgacgatgagttaggtggagcaatggagcatttggaaagattagaa
attaaaagtgttgcaagcttcaaaggtgatagcagaacgagagctcgtgttgtcgccatt
gagaagagagcggaaatttctaaaattgtagggattttaagagcaccaggttggtcatta
aaaaatgtagaatatgtttccaaaaaatcctcgtacgcgattttcattccaaaagataaa
cgtctgccctttatcacaattcacaaaaatgatttaagcgatttaagtggtgaaaattgg
attgaaaatattttgaaacaccacgatcagttgttttcagttgagattacaaggtggagt
atttactctcgttaccctatgggtgtattaggtgaaaagctgggaaatattactgacgtg
gaggcttacactaatgcgcttttgctagaaaatggaattagtagctctcccttctctgat
gaggttttaaactgcttgcctcctgatgattggattatctcacatgaggaaataaaaaaa
cgaagagatttaagaaatgagttaattattaccattgatcctgaaacagctcgtgacttg
gatgatgctgtttcctgtcgcgctcttgacaatggcacttatgaagtgggtgtccacatc
gctgatgttactcattttgtaaaaccagattcagcattggacaaagaggcagcttcgcgg
gctacaacagtataccttgtgcaaaaggctattccgatgcttcctcctctgttgtgtgaa
cgactttgttcattaaatcccaacgttgagcgtcttgcatttagcgttttttggaaactc
gactccaatggtaaggaaattggtaagcgttggtttggcaaaacagttataaagacatgt
gccagacttgcctacagtgaggctcaaggtgtgatcgaaggaaagtcctgggatgatgct
gtaggcaaaccgataggaggtacgcatactccaaaagatgttgaaacgtctatattaaca
ctttgcgaaatttcgagaaagcttcgcaaagatcgatttgctaagggcgctgtagagatt
aactcgacagaactcaaattccaattagatgaatatggaatgccgaataaatgcgaggta
tatgagcaaaccgatgcaaatcatctcatcgaagagtttatgcttctcgccaatagatct
gttgctgaacatatcagtaaaaatttctccaataattccttgcttcgtcgccatgcaagt
cctaaagagaaacaaattaatgagttttgtcactttctaaaaagcatgaacttcgatttc
gatgcatcgtcttcagctgcatttaatgcctctatggtacgactcagaagcacttttaat
gaagaattggtagaattatttgaaaatatggcagttcgctcgttaaatcgtgctgaatac
ttttgtactggcgatttcggtgagaaaacagactggcaccattacgctctttcatttaat
cattatacccattttacttctccgattagaagataccctgacattattgttcatcgttta
ttggaacgtagccttaagaacacatccccgggtattgacaaaaaaaattgttcgttagtg
gctgcacattgtaatgaaaagaaggagaaatccaccactgtgcaagaagatagccagcaa
ctctttttgtctgtatatattgctgagtattgcaaaaagcatgataagaaatctatgcca
gttcaagcatttgcgactagaatatctggaaattctattgatgtctatatctctgaatat
ggaatatccaacagagtagacctcagttcagatgatagaattaaaagttttatagttgct
cccgatgactcctctgttaaaattacgttgtttgatgattctcaaaagactatagctctt
acggatcgtttccaagtttatttatattctgattacagtcgtacatttttcagtattcgc
tgtagtctagtttctttgaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (47)   

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