KEGG   Schizosaccharomyces pombe (fission yeast): SPAC644.16
Entry
SPAC644.16        CDS       T00076                                 
Name
(RefSeq) putative RNA-binding protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SPAC644.16
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPAC644.16
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     SPAC644.16
    U7-dependent histone pre-mRNA processing factors
     SPAC644.16
SSDB
Motif
Pfam: RRM_1 CSTF2_hinge CSTF_C RRM_7
Other DBs
NCBI-GeneID: 2543462
NCBI-ProteinID: NP_593884
PomBase: SPAC644.16
Ensembl: SPAC644.16
UniProt: Q9P6P7
Position
I:2701588..2703006
AA seq 422 aa
MNPSCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAA
SAVRNLNNYDAGTRRLRVDFPTADQIRRLDKLLGPSRYGYYPQSYANQSYTYGNNFGSYP
PTQPSTQPLPQSYGYPSYPPAGYRGGSARPSGVLANDEVYRVLAQLAPNEIDYMLSAIKA
LCLEAPEQAAQLFETNPQLSYAVFQAMLMKRYTSESVVADLLIPAGVNLPGAQEPNRGYF
SPMHTYSSAVPGPISVPSAPYGRASSTIAEVSPMYGSHAAPYASTPSAAVGSSRGSTPAS
ATVPISPARGFPTTSAYNPAPPAYGMANPAYGSTGIRSSSIPSSGSIRSPSLTTTSAQAT
TNATNNITTTTAAQDENATKAALIAQLMALTDDQINVLPPDQKERILQIRQALPSSYKTE
SK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatccatcatgtgtggtttatgtgggcaatattccttatgaaatggctgaggaacag
gtcattgacatctttaagcaaagtggacctgtgaaatcctttcagttggtcattgaccct
gaatcagggcaaccaaagggatatgggttttgtgaatatcacgatcctgctactgcagcg
tctgcagttcgaaaccttaacaactacgatgctggaacacgtagattgcgtgtagatttc
ccaaccgctgatcaaatacgaaggcttgataaattattaggtccttcaagatatggatat
tatcctcaatcttatgccaatcaatcttacacatatggaaataacttcggttcgtatcct
ccaacccaaccttctactcaacctctgcctcagtcttatggatatccttcatatccccct
gctggctatcgtggtggctctgcgaggccatccggcgttttagcaaatgatgaagtctat
cgcgtgttagcacaacttgcacctaacgaaattgattatatgttatctgctatcaaagct
ctttgtttggaagcaccggagcaagcagctcaactttttgagacaaatccccaattgagt
tatgctgtttttcaagctatgcttatgaaaagatacacctctgaatccgtagtggcagac
ttgctgattccggccggtgttaatttaccaggtgcgcaagaacctaatagaggttacttt
tcacccatgcatacgtatagctctgcagttcctggacctattagtgtgccgtctgctcca
tatggacgggcttcctcaacaatcgccgaagtttcaccaatgtatggttcgcacgccgca
ccatatgcttcgactccatctgcagccgttggatcgtcgcggggttcaacccctgcttct
gccactgtaccaatttctcccgctcgaggttttcctactacctcagcttataatcccgct
ccccctgcctatggaatggcaaatccagcttatggttcaacaggcatcaggtcaagcagt
attccctcatctggttccatacgaagcccatccctaactacaacttctgcacaagctact
acaaatgctaccaacaacataactactacaactgcagcacaagatgaaaatgcaaccaag
gctgcattaatagctcaattaatggcactgacagatgatcaaatcaatgttttgcctcct
gaccaaaaagagcgaatccttcaaattcgacaagcattgcctagtagttacaaaacggag
agtaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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