KEGG   Schizosaccharomyces pombe (fission yeast): SPAPB1A10.03
Entry
SPAPB1A10.03      CDS       T00076                                 
Symbol
nxt1
Name
(RefSeq) mRNA export receptor Nxt1
  KO
K14285  NTF2-related export protein 1/2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03008  Ribosome biogenesis in eukaryotes
spo03013  Nucleocytoplasmic transport
spo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPAPB1A10.03 (nxt1)
   03015 mRNA surveillance pathway
    SPAPB1A10.03 (nxt1)
   03008 Ribosome biogenesis in eukaryotes
    SPAPB1A10.03 (nxt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPAPB1A10.03 (nxt1)
   03009 Ribosome biogenesis [BR:spo03009]
    SPAPB1A10.03 (nxt1)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SPAPB1A10.03 (nxt1)
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    SPAPB1A10.03 (nxt1)
SSDB
Motif
Pfam: NTF2 Mtr2
Other DBs
NCBI-GeneID: 2543644
NCBI-ProteinID: NP_593517
Ensembl: SPAPB1A10.03
UniProt: P0CAN8
Position
I:<1863363..>1863762
AA seq 115 aa
MESSVKYAQEFVQRYYSSLDTNRNGIAEFYRENSLILWNGKPMQVTEFTSMIVNLPYSKT
KVEDFDSQQVMGNDMNIIIVVSGTIRFDGKKPHVFSYVSFYCIYLLVLRSSTNFL
NT seq 348 nt   +upstreamnt  +downstreamnt
atggagtcgagtgtaaaatatgcgcaggagttcgtccaacggtattactcatctcttgat
acgaacagaaatgggatcgcagaattttacagagaaaatagtttgatcttatggaatgga
aaacccatgcaagtaaccgaatttacctctatgatagttaatcttccatactccaaaact
aaagttgaggatttcgatagtcaacaggtcatgggtaatgatatgaatatcataattgtt
gtttcaggaacaatacgtttcgatggaaaaaaacctcatgtattttcgtatgtcagtttt
tattgtatttaccttcttgtactaagatcctctactaacttcctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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