KEGG   Schizosaccharomyces pombe (fission yeast): SPBC1734.06
Entry
SPBC1734.06       CDS       T00076                                 
Symbol
rhp18
Name
(RefSeq) postreplication repair E3 ubiquitin-protein ligase
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:spo04121]
    SPBC1734.06 (rhp18)
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPBC1734.06 (rhp18)
Enzymes [BR:spo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SPBC1734.06 (rhp18)
Ubiquitin system [BR:spo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SPBC1734.06 (rhp18)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    SPBC1734.06 (rhp18)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 SAP zf-RING_UBOX zf-RING_5 RNF220 zf-RING_6 PRP21_like_P zf-RING_10 CpG_bind_C zf-C3HC4_4 U-box zf-RING_4 zf-rbx1 DZR_2 RdfA AKAP95 zf-Nse
Other DBs
NCBI-GeneID: 2539686
NCBI-ProteinID: NP_595423
PomBase: SPBC1734.06
Ensembl: SPBC1734.06
UniProt: O74747
Position
II:1069887..1072065
AA seq 387 aa
MNELDATDPSDWNQTKIPSLKGLDSSLRCLICHEYFRAPLITSCSHTFCSFCIRDYLREH
PMCPACRAPEQESRLRKNTILEEILESFKVIRPTLFEFLKVENVPKPVLQAPETVIAQDS
ASGDEEWEDDLASNSSPASIAKKTSRDSKKRKREDLVHCPACSNLVPHNQINQHLDSCLN
SPSSPSSSSSPYKNKDNSKSNSLLSFKTDDDSITKRRLRSFNSADELPLKDRVRLPKLTY
ALLSESKIRSKLSEMGLPTDGHKQLLQRRHAKWVTLYNSNLDQKQPVSKRNLIRQLIDWE
RVQSKSIGVEKEKLGGGDWEKAYAEDFADLINRAKQSTTNKNDSLRNTAVESSTEPSTSN
GFPATSVSPPLTIDLTNSQTGSDGPQS
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgaatgaactagatgctacagatccatctgattggaaccaaacgaaaataccatcgttg
aagggcttggattcttctttacgatgtctgatttgtcatgaatactttcgcgccccctta
attacttcttgctcacacaccttttgttcgttttgtatacgcgattatctgagagaacat
cctatgtgccctgcttgtcgtgctcctgagcaagaaagccgcttaagaaaaaacactata
ttagaagagattttagagtcctttaaagtgatcaggccaacattgtttgaattcttaaaa
gtagaaaatgtgccaaagccagtacttcaagctcctgaaacagttatcgcacaggattca
gcttctggcgatgaggaatgggaagacgacttggcttcaaattcatctcctgcttctata
gctaaaaagacatctagggattctaaaaagaggaaacgtgaggatttagttcactgccct
gcatgttcaaatttagttcctcataatcaaattaatcaacacttggattcttgtcttaac
tcaccttcttccccgtcttcctcttcctcaccttataaaaataaggataatagtaaatct
aattcattactatcattcaaaacagatgatgattctatcacgaagcgcaggttaaggtcg
tttaactctgcagatgaactacccttgaaagatcgagtgcggcttcccaaactaacttat
gcactcctttccgaatcaaaaattcgttccaaattatcagagatggggcttccaaccgat
ggacataaacaactattacaacgtcgacatgctaaatgggttaccctttacaattctaat
ttagaccagaaacaacctgtttcaaaaagaaatttaattcgccaacttatagattgggag
cgcgttcagtcgaaatcaattggagtagaaaaagaaaaactaggagggggcgattgggag
aaggcatacgctgaggattttgctgatctcatcaaccgtgcaaaacaatcaacaactaac
aaaaatgattcattgaggaacactgctgttgaatcttccaccgaaccttctacatctaac
ggttttcctgccacttcagttagtccccctcttactattgaccttaccaattcacaaacg
ggatccgatggaccacagtcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (58)   

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