KEGG   Schizosaccharomyces pombe (fission yeast): SPBC19C2.14
Entry
SPBC19C2.14       CDS       T00076                                 
Symbol
smd3
Name
(RefSeq) Sm snRNP core protein Smd3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
spo04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPBC19C2.14 (smd3)
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    SPBC19C2.14 (smd3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    SPBC19C2.14 (smd3)
   03041 Spliceosome [BR:spo03041]
    SPBC19C2.14 (smd3)
   03032 DNA replication proteins [BR:spo03032]
    SPBC19C2.14 (smd3)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     SPBC19C2.14 (smd3)
Spliceosome [BR:spo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    SPBC19C2.14 (smd3)
  U2 snRNP components
    SPBC19C2.14 (smd3)
 Complex B
  U1 snRNP components
    SPBC19C2.14 (smd3)
  U4/U6.U5 tri-snRNP components
    SPBC19C2.14 (smd3)
 Complex C
  U2 snRNP components
    SPBC19C2.14 (smd3)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     SPBC19C2.14 (smd3)
SSDB
Motif
Pfam: LSM Kringle
Other DBs
NCBI-GeneID: 2540884
NCBI-ProteinID: NP_595699
PomBase: SPBC19C2.14
Ensembl: SPBC19C2.14
UniProt: Q9UUC6
Structure
Position
II:1700904..1702760
AA seq 97 aa
MSLCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQVY
IRGSHIRFLIVPDMLRNAPMFKVGPGRSVPLPTRGRR
NT seq 294 nt   +upstreamnt  +downstreamnt
atgtctctgtgtattaagttgcttcatgagacccaaggccatatcgttacgatggagttg
gaaaatgggtctacgtatcgtggaaagttaattgaagcggaagataatatgaattgtcaa
atgagagatatcagtgtaactgctcgagatggtcgtgtttctcatttggatcaagtttac
attcgtggttcacacattcgttttctcatcgttcctgatatgcttaggaatgctcctatg
ttcaaagttggccctggcagaagtgttcctttacctacacgtggacgacgataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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