KEGG   Schizosaccharomyces pombe (fission yeast): SPBC28F2.04c
Entry
SPBC28F2.04c      CDS       T00076                                 
Symbol
cwf7
Name
(RefSeq) splicing factor Cwf7
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPBC28F2.04c (cwf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spo03041]
    SPBC28F2.04c (cwf7)
   03400 DNA repair and recombination proteins [BR:spo03400]
    SPBC28F2.04c (cwf7)
Spliceosome [BR:spo03041]
 Complex B
  Other components
   Prp19 complex
    SPBC28F2.04c (cwf7)
 Complex C
   Prp19-CDC5 complex
    SPBC28F2.04c (cwf7)
DNA repair and recombination proteins [BR:spo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    SPBC28F2.04c (cwf7)
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 2540585
NCBI-ProteinID: NP_595665
PomBase: SPBC28F2.04c
UniProt: Q9USV3
Structure
Position
II:complement(<1577407..1578049)
AA seq 187 aa
MSYNISLDSLPYFESTYNEEDRSAAAQIVEEELKRSGGLLIKQEEQKKKFQSHRLSDRLE
NAIVAAGKGEKLAAIDVQRYIQLKPPGTRESLLQSAVVWEYQKSRNDNLYLLEKHGEKAF
DSSLEALEVQLELLEKELVNTKKLSQGCNRKRKHYQMEVGARLAEAEVKFGQLLQSSIQC
RVATLLS
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagttataatatatctttggattcattaccttactttgaatctacttataacgaagaa
gatagatcagcagctgctcaaattgttgaggaggagctaaagagatctggaggtttacta
attaaacaagaggaacagaaaaagaaatttcaatcccatcgtttatcagatcgactggaa
aatgccattgttgcggctggaaagggagaaaaacttgcagccatcgacgttcaacgctac
atacagctaaaaccaccgggaacccgtgaaagcctgttgcagtccgctgttgtatgggaa
tatcaaaaatctcgcaatgataacctttatttgctagaaaagcatggagaaaaagcattt
gatagttcgttggaggctttagaagttcagctagaattattagaaaaagagttagtaaac
accaaaaaactttcgcaaggatgtaatcgtaaaaggaagcattatcaaatggaagtgggt
gcccgacttgctgaagctgaagtaaagtttggacaattgctgcagagcagcattcagtgc
cgtgttgctactctcttgtcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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