KEGG   Schizosaccharomyces pombe (fission yeast): SPBC776.04
Entry
SPBC776.04        CDS       T00076                                 
Symbol
sec2302
Name
(RefSeq) putative COPII cargo receptor subunit Sec23b
  KO
K14006  protein transport protein SEC23
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    SPBC776.04 (sec2302)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPBC776.04 (sec2302)
Membrane trafficking [BR:spo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    SPBC776.04 (sec2302)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS Gelsolin zf-Sec23_Sec24 Vps36-NZF-N
Other DBs
NCBI-GeneID: 2541164
NCBI-ProteinID: NP_596319
PomBase: SPBC776.04
Ensembl: SPBC776.04
UniProt: O94672
Position
II:3178560..3181338
AA seq 765 aa
MNFEDIEDQDGIRLSWNTFSATPAENARAVIPIAAMYTPLHENERMTIEQYDPVACRAPC
RAVLNPYCHVDLRARFWICPFCFQRNPLPAQYSDISSNSLPLELLSQSTTMEYVLSKPVK
SPPVFLFVMDTAVDESELTALKDAVIVSLSLLPPDAIVGLITYGSLIQVHEIGFEAMPKS
YVFQPAADYSTMKLQQLLALSGNQIRSSSSKAKISGTGITLNLGAASRFLMPVQKCEMHL
LNILEQLQPDCLEVPAGQRQLRCTGAAVKIASDLLGIAFPKCGSRIELFCGGPCTVGLGQ
VVSTELKEPMRSHSEIANDKAKHFKKSKKFYSSLAERLSNQGHALDLFAGCLDQVGIMEM
ENLVNNTGGAIVLSDSFTTSIFKQSFQRLFSVDASGYLKMGFMANLEVLTSKGLTICGMI
GNGVGENKKGTNISDTQIGISKTNSWKMAAISPKSSYALYFDLGKEMGNPNSQRPTQAFI
QFLTYYQHSSGTYRLRVTTISRSFITGNAKSISESFDQEAAAAIVARMALFKCQTEDEMS
VTRWIDRNLIRLCQHFADYRKEDPSSFRLLPNFTLYPQFIFHLRRSPFLHIFNNSPDETS
FYRHMLNVADVNDSLIMIQPTLQSYSFNEPEGVPVLLDSVSIKPDVILLLDTYFHILIFH
GSTIAQWRNAGYQEQPEYVNLKELLLAPRLEVTELLADRFPIPRFIVCDQGGSQARFLLS
RINPSVSFNKSSQFSPMSKDSETVLTDDVNLQKFMDHLRKMAVIS
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgaattttgaggacatagaagatcaagatgggatacgactttcatggaatacgttttca
gcaacacctgctgaaaatgctagagcagtcattccaattgctgctatgtacactccttta
catgaaaatgaaaggatgacaatagaacagtatgatccagttgcatgcagagccccgtgt
cgcgctgtactaaatccttattgtcatgtcgatctgcgtgctagattctggatatgtccg
ttttgttttcagcgaaatcctcttcctgctcaatatagcgatatttccagcaacagtctt
ccgttggaattgctcagtcaaagtactaccatggagtatgttctttcaaagcctgtaaaa
tctcctcctgtgtttttatttgttatggacaccgcagttgatgagtcggaactcactgct
ctcaaagatgcagtcatagttagtcttagtttgctccctccagatgccattgttggttta
attacctacgggtctttaatccaggttcatgaaataggatttgaagctatgccgaaatcg
tatgtctttcaacccgctgctgattacagcactatgaagcttcaacaactattagcgtta
agtggtaatcaaattcgctcttcttcttctaaagcaaaaatttctggtacaggcattacc
ctcaatcttggtgcagcctctcgctttcttatgcctgtccagaaatgtgaaatgcacttg
cttaacattcttgaacaacttcagccggattgtctcgaagtaccagctgggcaaaggcaa
cttcgatgtactggtgctgcggtgaagatagcttccgatttactcggaattgctttccct
aaatgtggctcgagaattgagttattttgtggtggtccttgtacggttggcctgggtcaa
gttgtttcaacagaactcaaggaaccaatgcgatcacactctgaaattgcaaatgacaaa
gctaagcatttcaaaaaatctaaaaagttctattcttctttagctgaacgcctctccaac
caagggcatgctctagatttatttgctggttgccttgatcaagtaggtataatggaaatg
gaaaaccttgttaacaatactggtggtgccattgtgctatccgactcatttacaacttcc
atttttaagcagagctttcaaagattatttagtgttgatgcttccggttatctaaaaatg
gggtttatggcgaatttggaagtcttaacgtctaaaggcctcactatctgtggaatgatt
ggaaatggagttggtgaaaataaaaaaggtactaatattagtgatactcaaattggcata
agcaaaacgaattcttggaaaatggcagcgatttcacctaaatcttcatacgctctatat
ttcgatttgggtaaagagatggggaatccaaattcgcaaaggcctactcaagctttcatt
cagtttttgacatattaccaacattcttcgggaacttatcgacttcgtgttactaccata
tctcgctcatttattaccggcaatgcaaaaagtatttcggagtcgtttgatcaggaagct
gctgctgctatagtcgctcgcatggctttgttcaaatgtcaaaccgaggatgaaatgagc
gtaactagatggattgatagaaacctgattaggctttgtcaacactttgcagactataga
aaagaagacccttccagtttccgtttacttccaaactttacactttatccacagtttatt
tttcacttgaggagaagtccatttttgcatatctttaataattctcccgatgaaacttct
ttctatcgtcatatgttgaacgttgcggatgtcaatgattctttaattatgatacaaccc
actcttcaatcctatagctttaacgagcctgaaggggtacctgtattactggattctgtt
tccattaaaccagatgtgattttgctacttgacacctattttcatatactgattttccat
ggttcaactattgctcaatggagaaatgctggttaccaagagcaaccagagtatgttaat
ttgaaggagcttcttttagctccgcgtcttgaagttactgaattactggctgatcgcttc
cctattccacgatttattgtttgcgatcagggaggtagtcaagcgagattcctactatca
agaattaatccttctgtttcttttaacaagtcctctcaattttcaccaatgtcaaaggat
tctgaaacggttttaacggacgacgtaaacctgcaaaagtttatggaccatcttcgtaaa
atggctgtcatatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (58)   

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