KEGG   Schizosaccharomyces pombe (fission yeast): SPBC8D2.14c
Entry
SPBC8D2.14c       CDS       T00076                                 
Symbol
sed5
Name
(RefSeq) putative SNARE protein Sed5
  KO
K08490  syntaxin 5
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    SPBC8D2.14c (sed5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPBC8D2.14c (sed5)
Membrane trafficking [BR:spo04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    SPBC8D2.14c (sed5)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Syntaxin Syntaxin-6_N Syntaxin-18_N DUF6746 Vac_Fusion Lipoprotein_2 THOC7 BLOC1_2 Snapin_Pallidin AAA_13 MscS_porin Lebercilin ALMT EDR1 Cluap1
Other DBs
NCBI-GeneID: 2541263
NCBI-ProteinID: NP_595576
PomBase: SPBC8D2.14c
Ensembl: SPBC8D2.14c
UniProt: O13644
Position
II:complement(1381910..1385162)
AA seq 309 aa
MSFQDRTAEFQACVTKTRSRLRTTTANQAVGGPDQTKHQKSEFTRIAQKIANQINQTGEK
LQKLSQLAKRKTLFDDRPVEIQELTFQIKQSLSSLNSDIASLQQVVKGNRNKPAQMNQHS
ENVVVSLQNSLANTSMTFKDILEIRTQNMKASQNRTEKFVASSSMNANPLINSGNSISPF
ADYNDPKPEANEDYLSLNLGDGANTRYEQMALLESQTDTYSQQRMSSIQNIESTITELGG
IFSQLAQMVSEQRETVQRIDMHTDDIVSNIGSAQREIVKFYERMSSNRALLFKIFGIVII
FFLLWVLVT
NT seq 930 nt   +upstreamnt  +downstreamnt
atgtcatttcaagataggactgctgaatttcaagcatgtgtcacgaaaactcgatctcgt
ttgaggacaacgactgcaaatcaagcagtaggtggtcccgatcaaaccaagcaccaaaag
agcgaatttacaaggatagcccaaaaaattgctaaccaaattaatcaaactggcgaaaag
ttacaaaagctatcacaacttgcaaaaaggaagactttgtttgacgatcggccagtagaa
attcaagaactaacatttcaaattaagcaaagcttatcgtctttaaattcggatatagct
tcactacagcaggttgttaaaggaaatcgtaacaaacctgcccaaatgaatcaacatagc
gagaacgttgtcgtttctttgcaaaattctctcgcaaacaccagtatgacctttaaagac
attctcgaaattcggacacaaaacatgaaagcatcccagaaccgcacagaaaaatttgtt
gcctcgagttccatgaatgctaacccccttataaattctggaaactcgatttcaccattt
gctgattacaatgatcctaaacctgaagctaatgaagactatttatccttgaatctcggg
gatggtgctaacactcgttatgagcaaatggccttacttgaaagccagactgatacgtat
tcccagcagcgtatgtcttctatacaaaacatcgaaagtactattaccgagttgggtggt
attttttcgcaattagcacagatggtctctgagcaacgtgaaaccgtacaacggattgac
atgcatacagatgatatcgtctcaaatattggaagtgcccagagagagattgtcaagttt
tatgaacggatgtcttcaaatcgagcactacttttcaaaattttcggtatagtgattata
tttttccttctttgggtgctcgttacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (40)   

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