KEGG   Schizosaccharomyces pombe (fission yeast): SPCC1827.01c
Entry
SPCC1827.01c      CDS       T00076                                 
Name
(RefSeq) putative U3 associated protein Utp25
  KO
K14774  U3 small nucleolar RNA-associated protein 25
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPCC1827.01c
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SPCC1827.01c
SSDB
Motif
Pfam: UTP25 Helicase_C BUD22
Other DBs
NCBI-GeneID: 2538900
NCBI-ProteinID: NP_588547
PomBase: SPCC1827.01c
Ensembl: SPCC1827.01c
UniProt: O74974
Position
III:complement(2374000..2376316)
AA seq 652 aa
MAIESDLDGASMDELAGKSYEALLYLMNKNKKRKPEKKDDKEKSSKKVQKKNKVIESLNE
MEVEMEDENENENDEQEAIQYYINVESQDADETLHQEAQDSSEDPFHQHFDYDDSEVIKN
SIAAYDEGKLCKSIEESKLGVSQSFFPDVTKRLPCSCLSEIKNIDDLGLKQRILDSYKKQ
KPSGQLTSMQIELAKAMFNYQDVFFTNMSMKSHKLGTSLLALHALNHVFKTRDRVLKNSA
RISQNPELEFRDQGYTRPKVLILLPTRNSAFEFINLLISYSGTNQVENRKRFDNEFSIEK
EVISEKKPEDFRYLFSGNTDDMFRLGVKFTRKTVKLFSQFYNSDIIVASPLGLRLAIGNK
GDKKRDLDYLSSIEIAMVDQAHALVMQNWEHIECIFDELNGLPKEAHGCDFSRVRPWYLD
QQARYMRQTILFSQYNNLDINSFFSHYMSNIAGKVKFRSLLHGVLNRLGYKVTQTFVRIS
VDSIIKVPDARFSYFTGSILVQLKKYSQSGILVYIPSYFDFVRVRNYMDEEGINYSAISE
YSSVSDMTRARNLFYQGRTNIMLYTERAHHFRRFDFRGVKAVVMYGPPTNPQFYVELVRM
PMRTISEGNLDSDAAKCRIMYTKFDSICLEGIVGYQRVSNMCHGKHEVFEFL
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggcaattgaaagtgatttagacggtgcctcgatggatgaattggctggaaagtcttat
gaggctttattatatcttatgaataaaaataaaaagagaaaacctgagaaaaaagatgat
aaagaaaagtcatcgaagaaagtacaaaaaaagaacaaagttattgaaagtttaaatgag
atggaagttgaaatggaagatgaaaatgaaaacgaaaacgatgaacaagaagcaatacaa
tattacatcaatgttgaatctcaggatgccgatgagactttgcaccaagaagctcaagat
tcatctgaagacccatttcatcaacacttcgattacgatgactcagaagtcattaaaaat
tctattgctgcttatgatgagggaaagttatgtaagtctatagaggaatccaaacttgga
gtgtcacaatcgttttttccggatgtgaccaagagattgccttgctcgtgtcttagcgaa
ataaagaatattgatgatttgggactaaagcagaggatattggactcctataaaaagcaa
aagccatctgggcaacttacatccatgcaaattgagttagcgaaagcaatgttcaattat
caagatgtattctttactaacatgtccatgaaaagccataagttagggacttcactcttg
gcgcttcatgctttgaaccatgtattcaaaacaagagaccgtgttttaaaaaatagtgct
cgcatttctcaaaatcctgaattagaatttcgtgatcagggatacaccaggcctaaagta
ttaattcttttacccacaaggaatagtgcttttgaattcattaatttacttatttcatat
tctgggactaatcaagtagaaaatcgaaagcgttttgataatgaattctcgattgaaaaa
gaagtcatttcagaaaaaaagccagaagattttcgttatcttttttccggaaataccgac
gatatgtttcgactgggtgttaaatttacaagaaaaactgtcaagctattttcccagttt
tacaattctgacattatagttgctagtcctttgggacttcgtcttgctattggtaacaag
ggagataaaaagcgagacctcgattatttgagttcgattgaaatagcaatggttgaccaa
gctcatgctctcgtgatgcaaaactgggaacatattgaatgcatttttgatgaacttaat
ggtttgcctaaagaagctcacggttgtgatttcagtcgtgttcgtccttggtatcttgat
cagcaagccagatatatgcgccaaactatactattttctcaatataacaatctagatata
aattctttcttttctcactacatgtcaaatattgctggtaaggttaaatttcgctcgctt
cttcacggtgttttaaaccgcttggggtacaaagtgactcaaacttttgttcgcatttct
gtcgattctattattaaagttccagatgcccgcttttcctattttactggttctatacta
gtacaactaaagaagtattcccagagtggtattttagtttatataccttcatattttgat
tttgttcgtgtgagaaattacatggatgaggagggaattaactattctgccatatcagaa
tattcgagtgtatccgatatgactagagcccgcaatcttttttatcaaggtagaaccaat
ataatgctatatactgagcgcgctcaccatttccgtcgatttgactttaggggtgtaaaa
gctgttgtgatgtatggtcccccaacgaatcctcagttttatgttgaacttgttagaatg
ccgatgagaaccatctctgaaggaaaccttgacagtgatgcagcaaagtgtagaattatg
tatacaaagtttgattctatttgcctggaaggcatagtgggatatcagcgtgtatcaaac
atgtgtcatggtaaacatgaagtttttgaatttctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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