KEGG   Schizosaccharomyces pombe (fission yeast): SPCC24B10.22
Entry
SPCC24B10.22      CDS       T00076                                 
Symbol
pog1
Name
(RefSeq) DNA polymerase
  KO
K02332  DNA polymerase gamma 1 [EC:2.7.7.7]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03410  Base excision repair
spo04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SPCC24B10.22 (pog1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    SPCC24B10.22 (pog1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spo03032]
    SPCC24B10.22 (pog1)
   03029 Mitochondrial biogenesis [BR:spo03029]
    SPCC24B10.22 (pog1)
Enzymes [BR:spo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SPCC24B10.22 (pog1)
DNA replication proteins [BR:spo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase gamma complex (mitochondrial)
    SPCC24B10.22 (pog1)
Mitochondrial biogenesis [BR:spo03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    SPCC24B10.22 (pog1)
SSDB
Motif
Pfam: DNApol_Exo DNA_pol_A DNA_pol_A_exo1
Other DBs
NCBI-GeneID: 2539099
NCBI-ProteinID: NP_588025
PomBase: SPCC24B10.22
Ensembl: SPCC24B10.22
UniProt: Q12704
Position
III:940806..944722
AA seq 1018 aa
MFYKACPSTLTCSKWIHSIIKTKKFLYCRHYSSKSFIDNAPLRINPVGVQYLSPALQNQV
FPQQNTQISQLHLDLAKFHLAKHQLLNKETIKLPSFNFRLPPLQGKTISEHFYNIGLEFA
EPHLSKAIKFSKIDTPVQPKTWKRQPGWTKYAKDGSISCVPYPDSDCMVFDVEVLYKVSP
FAVVATAVSEDAWYCWLSPWLLGKSENDRQLIPSNPKGALFVGHNVSFDRQRIREEYNIK
SSRNVFLDTMSLHVATHGMCSRQKPTWFKARKAYIRSQSTETSEDDDSSSFDDDYQNYLK
QEPWLAHSSVNSLKDVAKFHCNITLDKSKRDDFASLEKEPILQKLNELITYCAHDTYSTH
QVFKKVFPQFLEVCPHPATFSAMLSLGSVFLPVNHSWTRYINGVEEQYQQMIQLVDQKLS
QYAEKAKDLINTKDTVLKDPWLRQLDWTPCNLYRKLKKATQEVPVVPKWYKKAYCKTEKR
AVITAKSRLAPILLRLKWKKHPLAWSDTYGWVFSVERTSKDEIEMLLDQGLVPCSREEDT
KLDYNNYIFFKVPHKDGPEARCGSPLSKSYQRYFEEGILQSDYEVAKKALEMSASCSYWS
SARDRIRSQMVVWDKDAELGVPSSVDGFGIILPCIIPMGTVTRRAVENTWLTASNSKKNR
LGSELKAMIRAPDGYTFVGADVDSEELWIVALMGDSQFRLHGATALGMMTLEGKKSEGTD
LHSKTAAILGVSRDSAKVFNYGRLYGAGLKHTTLLLMQMNPTLKTAEAKELAKKLYASTK
GVKSKMSKRLQEMGLPKLTFWSQGTESFVFNKLEAMAQLPSPRTPVLDAGITQALSSKNL
SKNSFMTSRVNWAIQSSAVDYLHLLLVSMNHLIKKYYLEARLSLTVHDEVRYLSSDKDKY
RVAFALQVANLWTRAFFCQRLGINELPQSVAFFSSVDIDHVLRKDVKMDCVTPSNKVPIP
PGEELTIESVLEKLEQSGQSLEPLEQIQCFVDVKATTSAEITEEDKKNIAYLKAQAFY
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgttctacaaagcttgtccaagtacattgacgtgttcgaaatggattcattcaatcatt
aaaactaagaaatttctatattgtcgacattattcttctaaatcatttatagataatgcc
ccactgaggattaacccggtcggtgttcaatacttatcacctgctctgcaaaatcaagta
tttccacagcaaaatacacagatttctcaattgcaccttgatctggcaaaattccatttg
gcgaagcaccaactactgaataaagaaacgataaagcttccatcctttaactttagactt
cctcctttgcaaggaaaaacgatttctgaacatttttacaatataggtttagaatttgca
gagcctcatctctcaaaggcaataaaatttagcaaaatcgatactccggttcagccaaaa
acgtggaagcgccaacctggttggaccaaatacgcgaaagatggaagtatttcttgtgtt
ccatacccggatagtgattgtatggtatttgatgtggaagttttatacaaggtgtctcct
tttgctgtcgtggctaccgctgtgtctgaagacgcatggtattgctggctatctccttgg
ctactgggaaagtccgaaaatgatcgtcaattaatcccatctaacccaaagggagctttg
ttcgtaggacataacgttagctttgatcgtcagaggattcgtgaggagtacaatatcaaa
tcttctcgtaatgtattccttgatacaatgtcattgcatgttgctacacatggaatgtgc
tctcgacagaaacctacttggttcaaagcgagaaaggcgtatattcgttcacaatctact
gaaacctcggaagacgacgactcttcctcgtttgatgacgattatcaaaattacttaaaa
caagaaccatggttagctcattcttcagttaattctttaaaagacgtcgcaaagttccat
tgcaacattacacttgataaatcgaaaagagacgattttgcatctttggaaaaggaacca
attctacagaagttgaatgaacttatcacatattgtgcgcatgatacatactctacacat
caagttttcaaaaaagtattccctcagtttttggaagtctgtcctcacccagctactttt
agtgctatgctatctctgggtagcgtatttcttccagttaaccattcatggacccgttat
attaacggcgtagaagaacagtatcaacaaatgattcaattagttgatcaaaaactgtca
cagtatgctgaaaaggccaaggatttaatcaatactaaggataccgtcctgaaagaccca
tggctccgtcaacttgattggacaccatgtaatctttataggaagttaaaaaaagcaaca
caagaggtcccagtggttcccaaatggtacaaaaaggcttattgtaaaaccgaaaaaaga
gctgtgattactgcaaaatctcgtcttgctcccatacttttacgtttgaaatggaagaaa
catcctttagcttggtctgatacctatggttgggttttctctgtcgaaaggacatctaaa
gatgaaatcgaaatgcttcttgatcaagggcttgtaccttgcagtagagaagaagataca
aaattggactacaataactacattttttttaaagtcccgcacaaagatgggcctgaagct
agatgtggttcgccactctccaaatcatatcagcgatacttcgaagagggtattttacaa
tcagattatgaagtggctaaaaaggctctagaaatgagtgcatcatgttcttactggagt
agtgctcgtgatcgaattcgatcgcaaatggtagtttgggacaaagatgctgaacttgga
gttccgtcctctgtcgatggttttggtattatattaccttgtattattccaatgggtact
gttactcgccgtgctgttgaaaatacatggctcactgcttctaactctaaaaagaatagg
ctaggatcggaattgaaagcaatgattcgcgctcccgatggttacacctttgttggagca
gatgtagattctgaagagttatggatagtagcattaatgggtgattctcagtttaggcta
cacggggctactgcattaggtatgatgactctggaaggaaaaaaatccgagggcactgat
ttacattctaagacggctgccatcttaggcgtaagtcgtgattctgcaaaggtgtttaat
tacggccgactatatggcgctggattaaaacacactactttgctattaatgcagatgaat
cctactttaaagactgccgaggccaaagaacttgctaaaaaactatatgcatcgactaag
ggtgtcaaatcaaaaatgagcaaacgtttgcaggaaatgggattaccaaagctaacattt
tggtcgcaaggtacagagagttttgttttcaacaaacttgaggctatggcacaattacca
tcccctagaactcctgttttagacgctgggataacgcaagctttgagcagtaaaaatctg
agcaaaaactctttcatgacatctagagttaattgggcaattcaatcatcagctgtggac
tatcttcatcttctcttggtatccatgaatcatttaattaagaaatattatctagaagct
cgcctttctttaactgttcatgacgaggttcgttatttatcatcagataaagataaatat
cgggttgcatttgccttacaggtggctaacttgtggactcgtgcgtttttttgtcaacga
cttggcatcaacgagcttccacaatctgtcgcatttttttcttccgttgatattgaccat
gtactaagaaaagatgttaagatggactgtgtaacaccctctaacaaagtccccatacct
cctggagaagagcttactatagagtcagttctagaaaaactcgagcagtccggtcaatca
cttgagccacttgagcaaattcagtgttttgtggatgttaaagctactacttcagcagag
attacagaagaagacaaaaaaaacattgcatatttaaaagcacaagcattttactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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