KEGG   Schizosaccharomyces pombe (fission yeast): SPCC4G3.18
Entry
SPCC4G3.18        CDS       T00076                                 
Name
(RefSeq) putative ribosome biogenesis protein Rix1
  KO
K14828  pre-rRNA-processing protein RIX1
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPCC4G3.18
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    SPCC4G3.18
SSDB
Motif
Pfam: RIX1
Other DBs
NCBI-GeneID: 2539542
NCBI-ProteinID: NP_587820
PomBase: SPCC4G3.18
Ensembl: SPCC4G3.18
UniProt: P87243
Position
III:complement(435804..438607)
AA seq 828 aa
MSDLLERGSLPLVKSWLAITFANEEDLPFQVPQIADILVHQKCIERLGTSENALSVRKNW
CTSLTKMLQSKDFRIRWSAIILIHCTISQSWDCLVEHGATWAKLLIALLNRPETPKTLEI
AMITVSKMFSSTVGRPAVTRELVTPNLPTFVNNCLRIAESGKCLCTVCSCLYQGIISHSP
TFRPFVSSIRNICIKILDGEEVVPSSLQKKAAVLYASLYRCVGKGNFEDYWKQSIISILK
EYHLTLDFLFQFVIEPQTYPTREENLMFPKLKGHYEETYQKALHRCRTLNLILISFLSTK
TDKIVLLPINALKDLIQRVYTVQLSLPVKSVESSVQALLFMVLPHLHTLVNELTLKLFVV
IPPAIILSFDSYLDSLNDCLLSESTHTGVLCSSLKLLSKFLDVTHMNVPLSKYENIVTLV
LEYLANSSKGLASKSIEFSKNRGHSQKKRKTLSESQAGDTLMSSEESHQLYDSDVMDCCF
SFLASILTHSIALPRLLRTKIDLCTLQISLSNPTSTVLISMHNLLLASILSPGDSQAVIV
PHAIRIISGPLGLVHPDPLVASHARSSMQTIESLIHPRFPPLQKHLSPSEFENTFESRFE
PVSLENQSHISPPQVDSQSEYKESSILAPSNPPFETESITDSTEIEGIKESFASTDTGLQ
NNSTATSENKRSESELTMSNVLSNEGDRNEEGSEINSSQPSTINHGTDHINIVSENKETT
VSLLHGDVEVEETTNVALNNSQDTETKFTAIDVDFVDRPTSVVSSQIENINGDENGNTTS
SVVETFEKTTDVVDEKTTSINVEGNGEDDEEEDNISLPSINLESDSDS
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgagtgatttattagaacgtggctctcttcctcttgtgaaatcttggttggcaataact
tttgcgaatgaagaagacttaccatttcaggtgcctcaaatagcggacatactggtacat
caaaaatgtatcgaaagattaggaacgagtgaaaatgctctttccgttcgcaagaattgg
tgcacgagtttaacaaaaatgttacaatcaaaagactttcgtattcgctggtcagctatt
attctcattcactgcactatttctcaaagttgggattgcttagtagagcatggagctact
tgggcaaaacttttaattgctttgttaaaccgaccagaaactcctaaaacattggagatt
gccatgataaccgtatcaaaaatgtttagctctactgtaggaagaccagcagttacaaga
gaattggtgactcctaatttacccacatttgtgaataattgcttacgaatcgccgaatct
gggaagtgtctttgtactgtttgttcttgtttgtatcaagggatcatctcgcattcacct
acctttcgtccatttgtttcctcaataaggaatatttgcattaaaattttagatggggaa
gaagtagtcccttcttcattacagaagaaagcagctgttctttatgcttcgttgtatcga
tgtgtggggaaaggaaattttgaagactattggaagcaaagtattatttcaatcctaaag
gaatatcatcttactttggattttttgtttcaatttgttatagaaccgcaaacataccca
actcgtgaagagaatttgatgtttccaaaactcaaaggccactacgaagaaacttatcag
aaagctttacacagatgcagaactctaaacttgattttaatttcttttttaagtacaaag
acggataaaatcgttttgcttcccataaatgctttgaaggatttaattcaacgtgtttat
actgtacaactttcattgcctgttaaaagcgtagaaagttcagttcaagctttgctattc
atggtccttcctcatttgcatacgctagttaatgagttaaccttaaagctttttgtggta
attcctccagctatcattctttcatttgattcttacctggattcattaaatgattgttta
ctttctgagtcaacacatactggggttttatgctcttctttaaagttactttcaaagttt
ttggatgtgacacatatgaatgtccctctttcaaaatacgaaaatattgtaacgctggta
ttagaatatcttgctaattcctctaaaggtttagcatccaaatccatagagttctctaaa
aatcgtgggcattctcaaaaaaagcgaaaaacactttctgaaagtcaagcaggagataca
cttatgagttcggaagagtctcatcagctttatgattcagatgtcatggattgttgtttt
tcttttttagcatccattttgactcattcaatagcattaccacgtttattacggaccaaa
atagatctttgcaccttgcagatatctttgtctaaccctacctcaacagttttgatatct
atgcataatttactccttgcgtcaattttatcaccgggagattcacaagcagtgatagta
cctcatgcaatacgtataatttctggtccattagggcttgtacatccagatcctctggtc
gcttcacacgcaaggtcatcgatgcaaacaatagaatcgctgattcatcctaggttccca
cctttgcaaaaacatctttcaccaagcgaatttgaaaatacgtttgagtcaagatttgag
cctgtttctcttgaaaaccaatcgcatatttctccaccccaggtggattctcaatcagag
tataaagaaagtagtattttggctccatcaaatcctccctttgaaacagagtcgattaca
gattccactgaaattgaagggatcaaagagtcttttgcatctacagatacaggcttacag
aataattctacagctacctccgagaacaaaagaagcgaatcagagctgactatgtctaat
gttctttctaatgagggtgacagaaatgaagaaggtagtgaaatcaactcttctcaacct
tcaactattaatcacgggactgatcacattaacattgtttcggaaaacaaggaaacaact
gtttcactgttgcatggagatgttgaggttgaggagactacaaatgttgcattaaacaat
tctcaggacactgaaaccaaatttactgctatagacgttgactttgttgaccgacctact
agtgtagtttcaagccaaattgaaaacataaatggtgatgaaaatggaaacacaacttct
tcagtcgtcgaaacttttgaaaaaacaacggatgtcgtagatgagaaaacgacttctatt
aatgtggaaggaaacggagaagatgatgaggaggaagacaatatctctttgccaagtata
aacttggaatctgatagtgatagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (42)   

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