KEGG   Schizosaccharomyces pombe (fission yeast): SPCC645.07
Entry
SPCC645.07        CDS       T00076                                 
Symbol
rgf1
Name
(RefSeq) RhoGEF family guanine nucleotide exchange factor Rgf1
  KO
K19842  RHO1 GDP-GTP exchange protein 1/2
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04011  MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:spo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    SPCC645.07 (rgf1)
SSDB
Motif
Pfam: CNH PH_5 RhoGEF DEP PH
Other DBs
NCBI-GeneID: 2539580
NCBI-ProteinID: NP_588116
PomBase: SPCC645.07
Ensembl: SPCC645.07
UniProt: Q9Y7U6
Position
III:1245211..1249470
AA seq 1334 aa
MDYRHPNALGVNESSRAYEEIFGAPRKREPARTVSTPAFMEPAPVSKKPLPPPTRRLPRK
PLPFRSTSLQPPSSQPPAPPTHQREASPVKNIEHSESFPSVFGTSNNHQIVPLTLKDGND
FGALYASLNTTPHFPQVSNHAPNNSNSPSLTWHTSSGDDSNQNPFFVRRQSQSSTSPVSD
SVDENLLSAVSSVTESVETNLHLDQNYPYGSPVRSSKNPFLSSNSRLPTDDSSHTVGSHS
FTSGTHPPIVSSNSAFTLPNAVTPAAQAPLIRSVSEYPANVSPPAQSLQLPKSTSNPADL
HLSIASASSHKNIFSGLDVFSNVFHGPSTTLRDREHDMRNRSFDHSTLAHYEAVKQQRLG
VEPTARSFTLSSYKSRASGNSLINDRSSTTTPTFVNSEASSPVHKNKRRRRIYAALLSRV
ASELLDRLQLGDITKDGLIYSNAFTGDHAVTVLMGIIHTSDRNLALLVGRSLDAQKFIHD
VTYDHRLRDSHREIYQLQGTGYRPFLRANDNASINNKNHHKELEDNESGTRISPSTLGDT
SFPNGIFTLLTHCYSPTCAKDHPCYSISCPRRLEQQHRLFAKMRANTEQSSSLAFDDKEQ
KLWIHSVPQEIAYSVSDRERKRQEVICEVIYTERDFVKDLEYLRDYWIKPLWASSCIPER
KKEKFIRTVFLNALEVQAVNSKLAEALTKRQNYKPIVDNIADIFLEHVPKFEPFIRYGAG
QLYGKYEFEKEKSSNPAFAKFVSDVERLKESRKLELNGYLTKPTTRLARYPLLLEAVLKY
TDEGNPDKQDIPKVINIVRGFLSRLNVESGKAENKFNLFHLNQQLVFKPGEHYDLHLLDA
NRQLIFKGPLKKRSAGSTSSESASDVTLFLFDHALLIVKPKTINKRELLKVFQRPIPLLL
LQLFLVDDNGLRIPYSSKQQLAAVSKAANGKPPSRFYPFSLQLLGRRGYEITLYATTEVS
RDKWLEHIDNQQTLLQHRNQWFESVTICSNFFVGDNKVNAIGVYDSGRRLLYGTDTGVYV
SLRKANSPLQFKPVRALNIPNISQLEVIEEYSLLLLLSDKVLYSYPLEMIDADTTQAPKK
ARKVSGHTTFFRVGICLGKVLVCAVKSSVLSATIKVFEPVTNYSKTRNMPSLKKFLTVNQ
DPLRIVKELYIPTESTSVHFLKNKLCVGCTRGFEVVSLDNLETQSLLDPADTSLEFVEKK
ENVKPIAIYRMNGGEFLLCYSQFAFYVNRDGWRSRPTWFVVWEGSPQNFALSYPYILAFE
PTFIEIRHVETSELIHVISGRNIRLLADGRGKLGDGGEIFYACDQRGENCETSVVCSLRL
TSAAAHAKEQHVDK
NT seq 4005 nt   +upstreamnt  +downstreamnt
atggattaccggcatccaaatgcactcggtgtgaatgagagctcgcgtgcttatgaggaa
atttttggtgctccaagaaaacgggagccggcgagaactgtaagtactcctgcgttcatg
gaaccggctccagtctcaaaaaaacctcttcctcctcccacgcgaaggcttcctcggaaa
cctttgccctttcgttccacgagtttgcagcctccatcgtctcaacctcctgcacctcca
actcatcagagagaagcatctcctgtgaaaaatattgagcacagtgaatcttttccttcc
gtttttggtacttcaaataatcaccagatcgtcccattgactcttaaagacggaaatgat
tttggtgctctatatgcatctttaaacaccacaccccattttcctcaggtatcgaatcat
gcgcccaataactctaattccccttctttgacttggcacacatcatccggtgatgattcc
aaccaaaatccttttttcgttcggcgtcagtctcagagtagcacgtctccggtttcggat
tcagtagatgagaacctcctttcagcagtctcttctgttacagagtccgtagaaacaaac
cttcatctcgatcaaaattatccttacggctctcctgttcgttcgtctaaaaatcccttt
ctctcttcaaattctcgattaccaactgatgattcttctcacactgttggttctcattca
tttacttcaggaactcacccacccattgtttcttctaattccgcctttacacttcccaat
gctgttactcctgcagctcaagcacctctcatacgtagtgttagtgaatatcctgctaac
gtttctccacctgcccagtcccttcagctaccaaaatctactagcaatcccgcggatctt
catttaagcatagcttctgctagcagccataagaatattttttctgggttggacgtcttt
tctaatgtctttcatggtccctctaccacattacgagacagagaacatgatatgcgaaat
cgctcatttgatcattctaccttggctcattatgaagcagttaagcagcagagacttggt
gttgaacctactgcaaggtcctttacgttgagctcttataagtcccgtgcaagtggaaat
tccctaattaatgatcgaagctctacaacaacgccgacgtttgttaattcggaagctagc
tcgcctgttcataaaaataaacgaagacgcagaatatatgctgccttactttctcgtgtt
gccagcgaattgttagatagactacagctaggtgatatcacgaaagacggtttaatttat
tctaatgcctttactggcgatcatgcagtcaccgtgctaatgggtattatacatacttct
gatagaaatctcgctttacttgtcggacgctctttagatgcacaaaaatttattcatgat
gttacctatgatcatcgtcttcgtgattctcatcgtgaaatatatcagcttcaaggtact
ggttatcgccccttcttacgcgcaaatgataatgcatccattaacaacaaaaaccatcat
aaggaattggaggacaatgagtcgggcactcgaatctcaccgtccacgttaggtgacact
tcttttccaaatggtatatttactttattgacgcattgttactctccaacatgtgcaaaa
gatcatccctgctattctatttcatgtcctcgacgattggaacagcagcacagactattt
gccaaaatgcgtgcaaacactgaacagtcttcctccctagcgtttgatgataaggaacaa
aaattgtggattcacagcgtaccccaggagattgcttatagtgtcagtgaccgggaaaga
aagcgtcaagaagtaatttgtgaggttatctatactgagcgagattttgttaaggatttg
gaatatcttcgggattattggattaaaccactatgggcttcatcttgtatacctgaacga
aaaaaagaaaaatttattcgtactgtgtttttaaatgctttagaggttcaagcagttaat
tctaaattggctgaagctcttactaaaagacaaaactataaacccattgtggataatatt
gcggatatatttttggagcacgttccaaaatttgagcctttcatacgatatggtgcaggc
caactctacggaaaatacgagtttgagaaggaaaagtcatctaatcctgcatttgctaag
tttgtcagtgacgttgaacgtctgaaagaatcacgaaagctagagctaaacggctatctg
actaaaccaactaccagattggctcgttatccattacttctagaagcggtattaaaatat
actgatgagggtaaccctgataaacaagacattccgaaggtcattaatatcgttagagga
tttctctcacgtcttaatgttgaaagcggaaaagcagaaaataagtttaacttgtttcat
ttgaatcaacagctggtctttaaacctggagaacattatgatttacatctgcttgatgcg
aacagacaattaatattcaaaggacccttgaagaaaagaagtgctggttccacttcttca
gagtctgcgtcggatgttactttgtttctctttgaccatgctttgttgatagtaaaacca
aagactattaataaacgtgaattattgaaagtttttcaaagacctattcctctattactt
cttcaactattccttgttgatgataatggattaagaatcccttattcaagtaagcaacaa
ctagcagctgtatcaaaagcagcgaatgggaagccaccttctagattttatccatttagc
ttacaacttttgggtcgtagagggtacgaaatcactctttatgcaaccactgaagttagt
agggataagtggttagagcatattgacaaccaacaaacattgctacaacatcgtaaccag
tggtttgagtctgttaccatttgctctaatttctttgttggtgataataaagtaaatgcg
ataggcgtttatgatagtggtcgtcgacttttatatgggactgacacaggtgtgtacgtc
tctcttcgaaaagcaaacagcccacttcaattcaagcctgtacgtgcgttaaatattccc
aacatttcacagcttgaggttattgaagagtatagtttattgctactgctttccgataag
gtgttatattcgtatcctttggaaatgattgatgcggatactactcaagcccctaaaaaa
gcaaggaaagtttctggtcatacaactttctttcgcgtaggaatttgtctgggtaaagtt
cttgtgtgtgctgtcaaaagttccgtcttgagtgctactataaaggtttttgaaccagtc
actaattactctaaaacacggaacatgccaagcttgaaaaaattccttactgttaaccaa
gacccattgaggattgtcaaagagctttatatacccacggaatcaacttcggttcacttc
ctgaagaataaactctgtgtcggatgtacgagaggttttgaggtggtcagtctcgataac
ctagagacgcagtctctactggatccagccgatacgtctcttgaatttgtggagaagaaa
gaaaatgttaaacctatcgctatctatcgtatgaatggcggtgaatttcttttatgctat
tcccaatttgctttttacgtaaatcgagatggatggcgttctcgtcctacatggtttgtt
gtttgggaaggaagtcctcaaaactttgccttaagttatccttatatattggcttttgaa
cccacttttattgaaatcagacatgttgaaacctctgaattgatccatgtcatttccggc
agaaacatccgtttgcttgctgatggaagaggaaagttaggggacggtggtgaaatattt
tatgcgtgcgatcaacgtggtgaaaattgtgagacaagtgttgtttgttcccttcgattg
acgagtgctgctgcccacgccaaagagcagcatgtagacaagtaa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (61)   

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