KEGG   Shewanella psychrophila: Sps_00830
Entry
Sps_00830         CDS       T05063                                 
Name
(GenBank) RND family efflux transporter, MFP subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
spsw  Shewanella psychrophila
Pathway
spsw01501  beta-Lactam resistance
spsw01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Sps_00830
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Sps_00830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spsw03036]
    Sps_00830
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:spsw02000]
    Sps_00830
   01504 Antimicrobial resistance genes [BR:spsw01504]
    Sps_00830
Chromosome and associated proteins [BR:spsw03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    Sps_00830
Transporters [BR:spsw02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Sps_00830
Antimicrobial resistance genes [BR:spsw01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Sps_00830
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 OEP CusB_dom_1 SAM_HAT_N
Other DBs
NCBI-ProteinID: AQS36022
UniProt: A0A1S6HKI6
Position
917901..919124
AA seq 407 aa
MAQVFTRSALALALLIGTATLIGCEKDVPKITPKLVVVEQVKTATVPLYGNYVGITQASL
DVEVRARVDGFVEDKSFIEGSAVKEGTVLYRIDNRPYSAVVNRLNANVESQQSMLDKARR
DVDRLKPLYEQDAASQLDFDNALSVLSQSRSSLAASEAELEEAELELSYTEIRSPISGLV
SRSEVDIGALVGSSGQSLLTRVKRVDPIYVTFNMSALDYLNARRRMTSYSEQKEAETEGK
AVEGFVTITLPDNSEYRYLGDVRFTDPSVNPETGTFQVRAELPNPDKELLPGQYTNVRIK
LNEVTNAIVIPQKATQVEQGGVYVMVVLPDHKVERRFIVIEHQGKMGVVVRSGLKAGELV
IVEGMHRVRHGQLAEPLTAEQYHKKEDTKQKKQALKQQELEQKQEQK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcacaggttttcactcgttcagcgctcgccttggcgttactcataggtacagcaaca
ctgataggttgtgagaaggacgtgcccaaaatcacccccaaattagtggtcgtcgagcag
gttaaaaccgctacagtgccactctatggaaattacgtagggatcactcaggcctcactg
gatgtagaggtcagggcgcgggtggatggcttcgttgaagataagagtttcatcgaaggc
agcgcagtgaaagagggcacagtgctctatcgtattgataatcgtccttatagtgccgta
gttaatagactgaacgccaatgtcgagtcacagcaatctatgttagataaggccaggcgt
gatgtggacagattaaagcctctctacgagcaagatgccgccagtcagctggacttcgac
aatgccttgtccgtgttgtcccaatcaagatcgagtctggccgcgagtgaggccgaatta
gaagaggctgaattggaattaagctataccgaaatacgctcacccatatcagggctggtt
agtcgttcagaagtcgacataggagccttagtgggaagcagtggccagtcattgttgacc
cgagtgaagcgggtagatccaatctacgtcacatttaacatgtcggccctggattatctc
aatgccagaagacgcatgaccagctacagtgaacaaaaagaggccgagaccgaaggtaag
gctgttgaaggttttgttaccatcaccttgcccgataacagtgagtatcgttatctgggt
gacgtacgtttcaccgatccatcggttaaccccgagacaggtacattccaggtacgcgcc
gagttacccaatcctgataaagaactgcttccaggccaatataccaatgtccgaatcaag
ctcaatgaggtgaccaacgccatcgttattcctcaaaaagccactcaagtcgagcaaggt
ggagtctatgtgatggtcgtgttgccggatcataaggttgaacgccgttttatcgtgatt
gaacatcaaggaaaaatgggcgtggtggtcaggagtggcctcaaggcgggagagctggtt
attgttgaaggcatgcatcgggtccgtcatggacaattagccgagccattaactgcggag
caatatcataagaaggaagacacgaaacagaagaaacaggcacttaagcagcaggaactt
gagcagaagcaggagcagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system