KEGG   Shewanella psychrophila: Sps_01051
Entry
Sps_01051         CDS       T05063                                 
Name
(GenBank) type VI secretion protein, VC_A0110 family
  KO
K11896  type VI secretion system protein ImpG
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsw02044]
    Sps_01051
Secretion system [BR:spsw02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Sps_01051
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AQS36240
UniProt: A0A1S6HL46
Position
complement(1167990..1169756)
AA seq 588 aa
MSQDKYFRDELAFLREQGKQFSDLHPHLARYLHGNNTDPDIERLLEGFAFLTGRLREKIE
DEFPELTHSMINMLWPNYLRPVPSTSIVSFSPLERGISHRQGIEKGCMLNSRPVAGQVCH
FSTCRDVNVYPLLVDKVEDFHSREASIIDIHFSNLSDLPLNEIGLEDLRFYLGGQHYSAQ
MLYLWLNHYLEGMAICVGDKQYSLPKSCFKSVGFDSGDGILPYPKNVYEGYRILQEYLAF
PDAFMFFDICKIHKCLPSGLTGNFSLKLTFSRTLPADVFIKQETFQLYCVPVMNLFKHDA
DPIDLTGKKIEYPIFPSSRSPENFEIFSVDKVQGWLDSDSGRMRGEERIYSPFESFQHEV
ERVRHRVALYYRLRVKESIREDGFDHFLSFVRGDETLSFDGNEAVSLSLTCTNRQLPMQL
GKGDICIATDSSPNFATFKNITEPNASLRPVLDGSMLWTLISNLSLNYLSLLSKDALCSI
IRAYDFKALIDRQAERVTQKRLDGIVSIESRPTERILRGLPVRGLLSEIVLDQTCFGSEG
DLYLFGTVLSRFFALYASINSFHELIVINAANQEKYTWDIQIGQQPLI
NT seq 1767 nt   +upstreamnt  +downstreamnt
gtgtctcaagacaagtatttcagggatgaattagcgtttctgagggagcagggaaagcaa
ttttccgatcttcaccctcatcttgcgcgctacctacacggcaataataccgatccggat
atcgagcgcttgctcgaaggatttgcatttttgaccggcaggttaagggaaaaaatagaa
gatgagtttcccgaactcactcactctatgatcaacatgctatggcctaattacctgcgc
ccggttcccagcaccagtatcgtcagtttctctcccttagaacgtggcatcagtcacaga
caagggatagagaagggctgcatgttgaatagcagacctgtggctgggcaagtgtgtcat
ttttccacttgccgtgatgtcaatgtctaccctctgctggtggataaggtagaggatttt
cattcgcgagaagcgtccattatcgatatccatttcagcaatttgagcgatctgccctta
aatgagataggactcgaagatcttcgtttctatctcggtggacaacattacagtgcgcaa
atgctctatctctggctgaatcattatcttgagggaatggctatctgtgtcggagacaag
cagtactctctgcctaaaagctgtttcaagagtgtgggattcgacagtggtgacggtatc
ttgccctatcctaagaatgtctatgaaggctaccgaattttacaggaatacctagcgttc
cctgatgccttcatgttcttcgacatttgtaagatccataaatgcttgccaagtggcctc
acgggtaacttctcgcttaaattaactttctcccgcaccttacccgcggacgtgtttatt
aaacaagagacgttccaactctattgtgtgcctgtgatgaacctgtttaaacatgatgcc
gatcccatcgacctcacaggtaagaagatcgaataccccatttttccatctagccgttcg
ccggagaacttcgagatattcagcgtcgacaaggtacagggttggttggattcagattca
ggcagaatgcgcggcgaagagcggatttatagcccgttcgagagtttccaacacgaagtc
gagcgagtcagacatcgtgtggctctctactatcgtctccgggtcaaggagagtattcgt
gaagatggcttcgatcatttcctctcctttgtcagaggggatgaaaccttaagtttcgat
ggtaacgaggcggtatctttgtctctgacctgtaccaaccgtcaattgccgatgcaactg
ggaaagggggatatctgtatcgctacagacagctctcccaatttcgccacctttaagaat
attaccgagcccaatgcatccctgagacccgtgctcgatggcagcatgctatggacgctt
atctcaaacttatctcttaactatttatctctgctctcgaaagatgccctgtgttcgatc
attcgagcctatgactttaaggcattaatcgaccgtcaggccgaacgagtgacccagaag
cgtctcgatggcattgtcagtatcgaatccagaccaaccgaacgcatattgcgaggtcta
ccagtacgcggcctgctgtctgaaattgtattggatcaaacctgtttcggctccgaaggg
gatctctacttgttcggtactgtgctaagccggttcttcgccctttacgccagtatcaat
tcatttcatgagttgattgtgatcaatgcagccaatcaggaaaagtacacatgggatatt
cagattggccagcaacctctgatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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