KEGG   Shewanella psychrophila: Sps_04610
Entry
Sps_04610         CDS       T05063                                 
Name
(GenBank) pseudouridine synthase family protein
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
spsw  Shewanella psychrophila
Brite
KEGG Orthology (KO) [BR:spsw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spsw03009]
    Sps_04610
Enzymes [BR:spsw01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     Sps_04610
Ribosome biogenesis [BR:spsw03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Sps_04610
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AQS39695
UniProt: A0A1S6HVW2
Position
complement(5232576..5233286)
AA seq 236 aa
MESKRARLDRFLSSELKINRKDVRLMLAQSRVRVDGTVAKDIQQLVDEFSHVSLDDRILK
SNTPSYVMLNKPVGVVSATRDAKHKTVIDLLAHPVKSELHIVGRLDLNTSGLVLLTNDGR
WSRKLMSPEAKVDKRYRVTLQNPLSDDYIHAFAKGFYFEFEDITTQAAKLEIISEYVAEV
ILTEGKYHQIKRMFGRFRNPVIGLHRCSVGKLLLDPDLHEGSSRNLTAAEVDGIFG
NT seq 711 nt   +upstreamnt  +downstreamnt
atggaatccaaacgagccagattagacaggttcctcagcagtgagcttaagatcaatcgt
aaagatgtacgcttgatgctcgcccagagcagggtcagagtagacggcaccgtggccaaa
gatatacagcagctggtggatgagttttctcacgtgtctctcgatgacaggatcctcaag
agtaatacacccagttatgtgatgctcaataaacctgtgggtgtggtgagtgcgacaagg
gatgctaaacacaagacagtgatcgatctgttagcacatcctgttaaatctgagctgcat
attgtcggtaggctcgacttaaacacctctggattggtgttattgaccaatgatggtcgt
tggtccagaaaactgatgtctccagaggctaaagtggacaagcgttatcgggtgacactg
caaaacccccttagtgatgactatattcatgccttcgccaagggcttctactttgaattt
gaagatattactactcaggcggccaagcttgaaattatcagtgagtacgtcgccgaagtg
attctgacagaaggtaaatatcatcaaattaaacgtatgtttggccgttttcgtaatcct
gtcatcgggctacatcgctgttcagttggcaagctgctattagaccctgaccttcacgag
ggatcgagccgaaatcttactgccgcagaggtggacggtatatttggttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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