KEGG   Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA2015
Entry
SPA2015           CDS       T00219                                 
Symbol
nei
Name
(GenBank) endonuclease VIII, DNA N-glycosylase with an AP lyase activity
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
spt  Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Pathway
spt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SPA2015 (nei)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spt03400]
    SPA2015 (nei)
Enzymes [BR:spt01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SPA2015 (nei)
DNA repair and recombination proteins [BR:spt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SPA2015 (nei)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS DUF4351 TniQ
Other DBs
NCBI-ProteinID: AAV77918
UniProt: Q5PCL7
Position
complement(2095830..2096621)
AA seq 263 aa
MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQIITRIETRGKALLTHFS
NGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKTILLYSASDIEMLTAEQLTTH
PFLQRVGPDVLDARLTPEEVKARLLSPRFRNRQFSGLLLDQAFLAGLGNYLRVEILWQVG
LTGQHKAKDLNEAQLNALSHALLDIPRLSYTTRGQADENKHHGALFRFKVFHRDGEACER
CGGIIEKTTLSSRPFYWCPHCQK
NT seq 792 nt   +upstreamnt  +downstreamnt
atgcctgaaggcccggaaattcgtcgtgcggcggataatctggaggcggcaatcaaaggc
aaacccttaaccgatgtctggtttgcctttgcacagttaaaaccgtatgaatcgcagctt
accggtcaaattattacccggatagagacgcggggaaaagcgttattgacccacttttca
aatggcctgacgctctacagccacaaccaactctatggcgtatggcgggtgatcgacacc
ggtgaaataccgcagaccacgcgtatattgcgcgtcaggctacaaacggcggataaaact
attctgctttatagcgcgtctgatattgaaatgctgacagcagagcagctcacgacgcac
ccttttttacagcgagtcggtccggatgtgctggacgcgcgtctcactccggaagaggtt
aaagctcgattgctgtcgccgcgttttcgcaaccgacaattttccgggctgttgctggat
caggcctttctggcgggactggggaattatctgcgcgttgaaatcctctggcaggtaggg
ttaaccggacagcataaagcgaaagatctcaacgaggcgcaactgaatgcgctttctcac
gcgctgttggatattccgcgcctttcctacacgactcgcggtcaggcggatgaaaacaaa
catcatggcgcactgtttcgctttaaggttttccatcgtgacggcgaagcgtgcgagcgg
tgcggcggcattattgaaaagacaacactgtcctcacgcccgttttactggtgcccgcat
tgccagaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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