KEGG   Strongylocentrotus purpuratus (purple sea urchin): 580431
Entry
580431            CDS       T01019                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    580431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spu03019]
    580431
   03041 Spliceosome [BR:spu03041]
    580431
Messenger RNA biogenesis [BR:spu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     580431
Spliceosome [BR:spu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    580431
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 PQQ_3 WDR54
Other DBs
NCBI-GeneID: 580431
NCBI-ProteinID: XP_011678541
UniProt: A0A7M7HLI4
Position
Unknown
AA seq 337 aa
MAMSYEEQILKEKKQLHMSVFAQCISPDGKYLLAGNNYGTIAVFSMRNALASDANENSRK
PIFTFKAFDGAIFALLSTENFLICGGSGDIKAWKWKDIQQKAPRVAWSLSVPHSANFGAV
ETNGLAYSRQDNTLYSGGGDSELHVWDLESGTCKHSYTDHTDYIHAVALFNTSAQVASGS
EDGTVRIWDTRTSGEPVAILEPSKHEECINNPRDKWISCVAVDPADDWLICGGGPSLSLW
HLRSLSPTTVFEAPKCQPHVVLYHDDAVISAGTSPNIYHWHVNGDSKLTTPCTAMDVYSV
VINTESEANKVLCSSGASSKIDVYTNFGYKAFSLDFC
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggctatgtcgtatgaggaacaaatcttgaaggagaagaagcagcttcacatgtcagtg
tttgcacagtgtatatcaccagatggcaagtacttactagctggtaacaactatggaaca
attgctgtcttcagtatgcgtaatgcactggcttcagatgcaaatgagaacagcagaaaa
cccatcttcacattcaaagcctttgatggtgctatttttgctctgttgtcaacagaaaac
tttttgatttgtggtggaagtggagatatcaaagcttggaagtggaaggacattcaacag
aaggcacctagggtagcctggtcactgtctgtgccccactctgctaactttggagcggtg
gaaacaaacggccttgcttacagccgtcaggacaacactctatactcaggtggaggtgac
agtgaattacatgtgtgggacttagagtccggtacatgtaagcattcttatacagaccac
actgactacatccatgctgtagcattgttcaatacatcagcacaggtcgcatcaggttca
gaagatggaacagtcaggatatgggatacaagaacgtcaggagaacctgtagccatactg
gaaccaagcaaacatgaggaatgcatcaataatccaagagataaatggataagctgtgta
gcagtggatcccgcagatgattggctgatttgtggtggtggaccatcattgagtctgtgg
catctgagatctctttctcctaccactgtctttgaggcacctaaatgtcagccacacgtt
gttctctaccatgatgatgctgtaatctctgcagggacgtctccaaacatctatcattgg
catgtgaacggtgattctaaactaaccacaccatgtacagctatggatgtctacagtgta
gtcatcaatacagagtcagaggctaacaaggttctgtgttcatcaggggcgagttctaag
attgatgtctacacaaactttggttacaaggctttctctttagatttctgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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