KEGG   Strongylocentrotus purpuratus (purple sea urchin): 582924
Entry
582924            CDS       T01019                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
spu  Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03040  Spliceosome
spu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:spu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    582924
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    582924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spu03041]
    582924
   04121 Ubiquitin system [BR:spu04121]
    582924
   03400 DNA repair and recombination proteins [BR:spu03400]
    582924
Enzymes [BR:spu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     582924
Spliceosome [BR:spu03041]
 Complex B
  Other components
   Prp19 complex
    582924
 Complex C
   Prp19-CDC5 complex
    582924
Ubiquitin system [BR:spu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   582924
DNA repair and recombination proteins [BR:spu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    582924
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 U-box NBCH_WD40 PAS_11 zf-Nse
Other DBs
NCBI-GeneID: 582924
NCBI-ProteinID: XP_030831190
Position
Unknown
AA seq 509 aa
MALVCSISNELPEVPVVSPASGRVFEKRLIEKFISENGSDPVNGEPLSEDQLIEIKVNPL
VKPRPPTATSIPAILKLLQDEWDACMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAAPGIAPGAAMPAAVAVQPSSVPEPMEAAEAGPMGMTEDIIQK
LQERANVLTAERKKRGKKVPDELAPSEDIRNYRPRASHPGLHSASIPGILALDLQASDTS
KVLTGGADRNAVVFNKDTEQVTAILKGHTKKVNNVIYHPTEDVVFTSSPDATIRIWLTQN
GSCSQVVRAHDAAVTGLSLHATGDFLLSCSEDRHWAFSDITTGRVLTKVSDDSVGHALTC
AQFHPDGLIFGTGTADSVIKIWDLKECTNVANFPGHSGPVTALAFSENGYYLATAADDAI
VKLWDLRKLKNFKNITLDDNYEIKSLTFDQSGSYLAVAGTDLRVFLCKQWQELAVFTDHT
SMTTGVRFGQHSSFLASSSMDRSLKFYNL
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgctagtttgttcaatttccaatgagttgccagaggttcctgtcgtgtcgccagca
tcagggcgagtctttgagaagcggctcatagagaagttcatctcggagaatggcagtgat
cctgtcaatggagaacctctctctgaagatcagctgatcgagatcaaagtgaatccattg
gtgaagccacggccaccgacggcaaccagcattccagcgatcctgaagctcctccaggac
gagtgggacgcctgcatgctgcacagtttcacgctccgtcagcagcttcagacggctcgt
caggagctctctcacgccctctatcagcatgacgcagcgtgccgtgtcattgctaggctc
accaaagaggtgactgctgcccgtgaagccttggctacactgaagccccaagcagcacca
ggcatcgcaccgggtgcagccatgcccgctgctgtggctgtccaacccagctccgtacca
gagccaatggaggctgctgaagccggtcctatgggcatgactgaggatatcatacaaaag
ttgcaagagcgtgccaacgtgctcaccgcagagcgtaagaagcgtggtaagaaggttccg
gatgaactggctccatctgaagatatcaggaactacagaccaagagcttctcatccaggt
ctgcacagtgccagtattcctggtattttggcgcttgatttacaggcatctgatacatcc
aaggttctcacaggaggagctgacagaaatgctgttgtgttcaacaaggatacggagcaa
gtgacggccatcttgaaaggtcacacaaagaaggtcaacaatgtcatctaccatcctaca
gaggatgtggtgttcacttcttcgcccgacgccaccatccgtatctggctcacccagaat
ggctcctgctcccaggtggtacgtgctcacgatgccgctgtaaccggtctcagcctccac
gccaccggagacttcctccttagctgctccgaggatcgtcactgggccttctctgacata
acgacgggacgcgtcctcaccaaagtctccgatgattctgtcggccatgctctgacctgt
gcccagttccatcctgacggtctcatctttggaaccggaaccgccgacagcgtcatcaag
atctgggatctcaaggagtgtaccaacgtggccaatttccccggccactccggtcccgtc
accgctctggccttctccgagaacggatactacctggccacggcagccgacgatgcaatc
gtcaaactctgggatctgcgcaagctgaagaacttcaagaacatcaccctagatgacaac
tacgagatcaaatcattgaccttcgaccagagcggttcgtacctagccgtagcaggcact
gatctacgagtgttcctctgcaaacagtggcaggagctggctgtctttacagatcacacc
agcatgacgactggagtacgttttggacagcactcatcattcttggcatcctccagcatg
gatagaagtctcaagttctacaacctataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (68)   

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