KEGG   Serratia sp. AS13: SerAS13_0245
Entry
SerAS13_0245      CDS       T02012                                 
Name
(GenBank) Phosphomethylpyrimidine synthase
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
sra  Serratia sp. AS13
Pathway
sra00730  Thiamine metabolism
sra01100  Metabolic pathways
sra01240  Biosynthesis of cofactors
Module
sra_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:sra00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    SerAS13_0245
Enzymes [BR:sra01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     SerAS13_0245
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: AEG26068
UniProt: A0A7U3YY12
Position
complement(284613..286556)
AA seq 647 aa
MSNVKKPRARKEQREEAQQFIDTLQGVSFPNSHRIYLQGSRSDVLVPMREIQLSPTLIGG
DKDNPQYEQNEAIPVYDTAGPYGDPQSELDVHRGLAKLRAGWIEERGDTEALTGVSSGFT
QQRLADEGLDHLRFEHLPLPRKAQPGKCVTQLHYARAGIVTPEMEFIAIRENMGRERIRG
EVLRHQHPGQSWGANLPQNITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAESLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHQENFLYQHFREICEICATYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVR
DYAAAQEAAKPIEVQLTGMEKMSAEFRSRGSELYHSAGNLQGEMSNE
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgtctaacgttaaaaaaccgcgcgcccgtaaagaacagcgcgaagaagcccagcagttt
atcgacactctgcaaggcgtatcctttcccaattcacaccgcatctatctgcaaggctca
cgcagcgatgtgctggtcccgatgcgtgaaatccagctcagcccgacgctgattggcggt
gacaaagacaacccgcaatacgagcagaacgaagctatcccggtatatgacaccgccggc
ccgtacggcgatccgcaatccgagctcgatgtgcatcgcggcctggcgaaactgcgcgcc
ggctggatcgaagaacgtggcgataccgaagccctcacaggcgtcagttccggattcact
cagcagcgcctggcggacgaagggttggatcatctgcgcttcgaacatctgccgctgccg
cgcaaggcgcaaccgggcaaatgcgtcacccagttgcactacgctcgcgccggcatcgtc
accccggaaatggaattcatcgccatccgcgaaaacatgggccgtgagcgtatccgcggc
gaagtactgcgccaccagcatccaggtcaaagctggggcgccaatctgccgcaaaacatc
acgccggaattcgttcgccaggaagtggccgccggccgcgccatcattcccgctaacatc
aaccacccggaatccgaaccgatgatcatcggccgtaacttcctggtgaaggtcaacgcc
aatatcggtaattcggcagtgacttcgtcaatcgaagaagaagtggagaagctggtgtgg
tccacccgctggggtgcggacaccgtgatggatttgtccaccggccgttatatccacgaa
acccgtgaatggatcctgcgtaacagcccggtgccgatcggcacggtacctatctatcag
gcgctggaaaaagtgaacggcgtggccgagagtctgacctgggaaatgttccgcgatacg
ctgctggagcaggcggagcaaggcgtcgactacttcaccatccacgccggtgtgctgctg
cgttatgtgccgatgaccgccaaacgcctgaccggcatcgtctctcgtggcggttcgatc
atggccaagtggtgcctgtcgcatcatcaggaaaacttcctgtatcaacacttccgcgaa
atttgtgaaatctgcgccacctacgacgtatcgctgtcgctgggtgacggcctgcggccc
ggctcgattcaggacgccaacgacgaagcacagttcgctgagctgcacacgctgggagaa
ctgacaaaaatcgcttgggaatatgacgtgcaagtgatgatcgaaggcccaggccacgtg
ccgatgcagatgatccgccgcaacatgaccgaagagctggaacactgtcacgaagcgccg
ttctataccttaggcccgttgaccaccgatatcgcacccggttatgaccacttcacctcc
ggcataggggccgcgatgatcggctggttcggctgcgctatgctgtgttacgtcacaccg
aaggaacacctcggcctgccaaacaaagaagacgtgaagcagggattgatcacctataag
atcgccgcccatgctgctgacctggccaaaggccacccaggtgcgcaaatccgtgataac
gccatgtccaaagctcgcttcgaattccgctgggaagatcagttcaatctggcgctcgat
cccgccaccgcccgtgcctatcacgacgaaaccctgccgcaggagtccggcaaaatcgcc
catttctgctcaatgtgcgggccgaagttctgctcgatgaagatctcgcaagaggtccgc
gactacgccgccgcgcaggaagcggccaagccgatagaggtgcagctgaccggtatggaa
aagatgtcggccgagttccgttcacggggtagcgagctgtaccacagcgccggtaacctt
cagggggagatgagcaatgaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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