KEGG   Serratia sp. AS13: SerAS13_2871
Entry
SerAS13_2871      CDS       T02012                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
sra  Serratia sp. AS13
Pathway
sra03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SerAS13_2871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sra03400]
    SerAS13_2871
Enzymes [BR:sra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SerAS13_2871
DNA repair and recombination proteins [BR:sra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SerAS13_2871
    RecFOR pathway proteins
     SerAS13_2871
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 TIP49 Mg_chelatase AAA_16 AAA_3 nSTAND3 AAA_14 Rad17 AAA_18 AAA_2 RNA_helicase AAA_17 NTPase_1 Bac_DnaA AAA_28 AAA_24 NB-ARC TsaE bpMoxR ABC_tran
Other DBs
NCBI-ProteinID: AEG28646
UniProt: A0A7U3Z2W8
Position
complement(3055939..3056943)
AA seq 334 aa
MIEADRLISAEPINEEEILDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVSRSANCLGLDLSEEGAHQVARRARGTPRIANRLLRRVRDFAEVRANG
VINGEVAMQALDMLNVDAEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRMATNHAYKHFGIAREE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagccgatcgcctgatttctgctgagccgatcaacgaagaagaaattcttgat
cgcgccattcgaccaaagctgctgacggaatatgtcggccagccgcacgtgcgtgagcag
atggaaatctttattcaggcggccaagcagcgtggcgacgcgctggaccatttgctgatc
ttcggcccgccagggctgggtaaaaccacgctggcgaacatcgtcgccaatgaaatgggc
gttaacctgcgcactacctccggcccggtgttggagaaggcgggcgatctggcggcgatg
ctgaccaacctcgagccgcacgacgtcttgtttatcgatgaaatccatcggttgtcgccg
gtggtcgaagaagtgctgtatccggcaatggaagattaccaactggatatcatgatcggc
gaaggcccggctgcgcgttcgatcaaactcgatctgccgccctttacgctggtgggagct
accacccgtgccggttctctgacctcgccgctgcgcgatcgcttcggcattgtgcagcgc
ctggagttctatcaggtcgccgatttgcagcatatcgtttcacgcagtgccaactgcctg
gggctggatctctcggaagagggcgctcatcaggtggctcgtcgggcacgcggaacgccg
cgtatcgccaaccgcttgctgcgcagggtgcgcgattttgccgaagtccgtgccaacggc
gtgatcaatggcgaagttgcgatgcaggcgctggacatgctgaacgttgatgccgaaggt
ttcgactacatggaccgcaagctgttgctggcgataatcgacaagttcatgggcgggccg
gtgggcctggataacctggctgcggcgattggtgaggagcgggaaaccatcgaagacgtt
atagaacccttcctgatccaacagggctttatccagcgaaccccgcgtggacgaatggcg
accaatcatgcctataaacactttggtattgcgcgcgaagagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (35)   

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