KEGG   Streptomyces rapamycinicus: M271_22255
Entry
M271_22255        CDS       T02907                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
src  Streptomyces rapamycinicus
Pathway
src03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:src00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    M271_22255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:src03400]
    M271_22255
Enzymes [BR:src01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     M271_22255
DNA repair and recombination proteins [BR:src03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     M271_22255
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AGP55967
Position
complement(5588454..5589113)
AA seq 219 aa
MAGTKSPEDAYTAAPFVPEGADLGALREAAAGCHGCPLHRDTTQTVFGAGDPAARVVLVG
EQPGDQEDRQGKPFVGPAGKVLDRALDEAGIDPDETYITNAVKHFKFIHVPERGKRRIHK
PPSLRELSACGPWLEAELELIEPEVVVALGATAGKALLGSSFRVTEQRGTRLEGDPSGPA
RGALIVPTIHPSAVLRADDRDAVYEGLVADLRVAGEALG
NT seq 660 nt   +upstreamnt  +downstreamnt
atggccggtacgaagagccccgaggacgcgtacaccgccgcccccttcgtcccggagggc
gccgacctcggcgcgctccgggaagcggcggccggatgccacggctgcccgctgcaccgc
gacaccacgcagaccgtcttcggcgccggggacccggccgcccgggtcgtgctcgtcggc
gagcagccgggcgaccaggaggaccggcagggcaagcccttcgtgggcccggcgggcaag
gtcctcgaccgggccctggacgaggccgggatcgacccggacgagacgtacatcaccaac
gcggtcaagcacttcaagttcatccacgtccccgagcgcggcaagcggcgcatccacaag
ccgccgagcctgcgcgagctctccgcctgcgggccctggctggaggccgagctggagctg
atcgagcccgaagtggtcgtggcgctcggcgccacggccgggaaggcgctgctgggttcg
tcgttccgggtgaccgaacagcgcggcacacggctggagggcgacccgtcgggaccggcg
cgcggcgccctgatcgtccccacgatccacccctccgcggtgctgcgggccgatgaccgg
gacgcggtgtacgaggggctggtggccgatctgagggtcgcgggggaggcgctgggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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