KEGG   Salpingoeca rosetta: PTSG_00610
Entry
PTSG_00610        CDS       T04136                                 
Name
(RefSeq) ubiquitin/ribosomal protein CEP52
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
sre  Salpingoeca rosetta
Pathway
sre03010  Ribosome
sre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    PTSG_00610
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PTSG_00610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sre03011]
    PTSG_00610
   04121 Ubiquitin system [BR:sre04121]
    PTSG_00610
Ribosome [BR:sre03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    PTSG_00610
  Archaea
    PTSG_00610
Ubiquitin system [BR:sre04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   PTSG_00610
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 TBK1_ULD
Other DBs
NCBI-GeneID: 16078673
NCBI-ProteinID: XP_004998077
UniProt: F2TWZ2
Position
Unknown
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVIEPNLKLLAQKYNCDKMICRKCYARLHPRAQNCRKKKCGHSSN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaagaccctcacgggcaagaccatcaccctcgaggtcgagccttct
gactccatcgagaacgtcaaggccaagatccaggacaaggagggtatccccccggatcag
cagcgtctcatcttcgctggcaagcagctggaggacggccgcacgctgagcgactacaac
attcagaaggagagcaccctccaccttgtgctgcgcctgcgcggtggtgtcattgagccc
aacctcaagctcctcgcccagaagtacaactgcgacaagatgatctgccgcaagtgctac
gctcgccttcacccccgtgcccagaactgccgtaagaagaagtgcggtcactccagcaac
ctccgccccaagaagaagctcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (934)   
   KEGG ORTHOLOGY (1)   
   RefGene (930)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (951)   

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