KEGG   Salpingoeca rosetta: PTSG_03638
Entry
PTSG_03638        CDS       T04136                                 
Name
(RefSeq) phenylalanyl-tRNA synthetase subunit beta
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
sre  Salpingoeca rosetta
Pathway
sre00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    PTSG_03638
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sre01007]
    PTSG_03638
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sre03016]
    PTSG_03638
Enzymes [BR:sre01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     PTSG_03638
Amino acid related enzymes [BR:sre01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   PTSG_03638
Transfer RNA biogenesis [BR:sre03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    PTSG_03638
 Prokaryotic type
    PTSG_03638
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 tRNA-synt_2d
Other DBs
NCBI-GeneID: 16075948
NCBI-ProteinID: XP_004995366
UniProt: F2U661
Position
Unknown
AA seq 601 aa
MPTISVSPEALYKGLGRTMTEKEFDKLCFDYGLELEVEREDEEGRPSETGKLVYKVEIPA
NRYDLLCLEGLVRALRVYLGDIEAPRFKHVDMKPEDMQQLTITPATQSVRPFCVAAILRG
VEFTQDVYERFIDLQDKLHQNICRRRALVAIGTHDLATITGPFVYDAQKPSDISFVPLRV
PKKDENGNATNETEVPTREYTAAELMVEYEKDQQLKQYLHIIKDEEVYPVIRDANGVVLS
LPPIINGNHSRITLDTKDVFIECTATDLTRAKIVLNMMVTMLPAKSIEPVHVTPPNGQES
HVYPEFKYRTEKVSAGDIYRRMGIKKEQATPEQLAALLTKMQLRGKLVDADAIEVEIPPT
RPDILHACDIWEDAAVAFGFDNIQATQPQVVTAGKQQPINKLSDHLRLITAQAGYAEALT
FALCTRDDNFKNLRRPDDGKTACVIANPKTKDFQVARTNLLAGLLRTLHNNSAMPLPIQL
FEISDVVLLDPSSDSGASNERRLAAVAMGKSPRFEALQGLLDYIMKMLEIPFDPSAVNPG
SKAYCLLPTQDPAFLGELGAADIVYNGARVGVLGVVHPEVLQNFDLRYPVSAFELAVHPF
L
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgcccaccatctccgtatcaccagaggccctgtacaagggcctcggccgaaccatgacc
gagaaggagtttgacaagctctgcttcgactacggcctcgaactcgaagtggaacgagag
gacgaggaaggcagaccctctgagaccggaaagctcgtgtacaaggttgagatccccgca
aaccgctatgatctcctgtgcctggagggccttgtgcgtgccctgcgcgtgtacctcggc
gatattgaggccccacgcttcaagcacgttgacatgaagcctgaggacatgcagcagctc
accatcaccccagccacccagagtgtgcgtcccttctgcgttgccgccatcctgcgcggt
gttgagttcacacaggacgtctacgagcgcttcatcgatctgcaggacaagctgcatcag
aacatctgccgccgccgcgccctggtcgccattggcacgcacgacctcgccaccatcaca
ggtccatttgtgtacgatgcgcagaagccaagcgacatcagctttgttcccctccgcgtc
cccaagaaggacgaaaacggcaacgcaacgaacgagacagaggttccgacacgcgagtac
accgctgcagagctcatggttgagtatgagaaggaccagcagctcaagcagtacctgcac
attatcaaggacgaggaggtgtatcctgtcatccgcgatgcgaacggcgtcgtcctctcc
ctcccgcccatcatcaacggcaaccactcgcgcatcacactcgataccaaggacgtcttc
atcgagtgcacagcaacagatctcacgcgggcgaagattgtgctgaacatgatggtgacg
atgctgcctgccaagtccatcgagcccgtccacgtcaccccgccaaacggccaggaatcg
cacgtctaccccgagttcaagtaccgcacggagaaggtgtctgctggcgacatctaccgg
cgcatgggcatcaagaaggagcaggccacacccgaacagctcgcagcgctcctcacaaag
atgcagctgcgcggaaagcttgtggacgcagacgcaatcgaggtcgaaatcccgccaacg
cgcccagacattctgcacgcgtgtgatatttgggaggatgccgctgttgcctttggcttc
gacaacattcaggcgacgcaaccacaggttgtgactgcgggcaagcagcagccgatcaac
aagctctccgaccaccttcgtctcatcacggcgcaggcaggatacgccgaggccctcacc
tttgccctgtgcacccgcgacgacaacttcaagaacctgcggcgcccagacgacggcaag
acggcgtgcgtcatcgccaacccaaagacaaaggatttccaggttgcacgcaccaacctg
ctggctggcctgctgcgcaccttgcacaacaacagcgccatgcctcttcccatccagctc
ttcgagatcagcgacgtagtgcttctcgacccgtcctcggactctggtgcgagcaatgag
cgccgtcttgcggctgttgccatgggcaagtcgccgcgctttgaggccctgcagggcctt
ctcgactacatcatgaagatgctcgagatcccatttgaccccagtgctgtcaaccctggc
agcaaggcttactgcctcctcccaacacaagatcctgccttccttggggagcttggcgct
gcggacattgtgtacaacggggcgcgcgtgggcgtgctgggtgttgtccatccagaggtg
ctgcagaactttgacctgcgctacccggtctccgcctttgagcttgccgtccaccccttc
ctctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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