KEGG   Salpingoeca rosetta: PTSG_05144
Entry
PTSG_05144        CDS       T04136                                 
Name
(RefSeq) DNA ligase
Organism
sre  Salpingoeca rosetta
SSDB
Motif
Pfam: DNA_ligase_OB_2 zf-CCHH DNA_ligase_A_M BRCT
Other DBs
NCBI-GeneID: 16074301
NCBI-ProteinID: XP_004993722
UniProt: F2UAM4
Position
Unknown
AA seq 664 aa
MAGGGKKAPLPECRFGLSCYRKNVKHFDEYSHPCKYGAACYRRDPDHFHKYTHPKASKTT
TAVAVAAAKAIADDDDDARVSDGSDSDGDARRRGKTTAKRKAGGVSDEDDDDDDSDDRGD
APAARRKPKIAKAARKAASDSGSSDSDSDGSGSKTSAATASSIRDLKVVFTGTFESGIRR
VVENEASKLGAIVGSSVSSKTDLLVIGGLVRPFGAKEDRASDLGVRVIFEKEWNDMVFAE
YRRRRTAKGATSTKKAHKKEKKATPHRDADDDDDDEDDDEDDNVDGNEDEDEDDDDGNGD
DDDADADADTPKPLHKLEDGESVDYTSPSGSSYKIKRTGDHYYCTCPAWRNQSAPVNART
CKHLCAYLGDAFEKARVGGVKTVPLKARGTPKPDLLLAQRWEARVDPTDWHMSEKLDGVR
AYWNGKELLSRLGNAFAAPSWFTGTLPRDMTLDGELFMGRGRFNDTVSVVRTVGSKRWTD
VTYQVFDCPSEGARVFEERVEALQRWHSAQPSGHVKHVSLVQHTRVRDVKHMEDELERVV
ARLGGEGLMLRQPKSTYAKTRSSTLLKVKRFYDAEARVLAHVPGKGRHKGAMGALEVEME
CGKKFKIGTGFSDAQRRSPPKVGAIITYKFQELTPDGIPRFAAFVGERADAAGPKDYIPK
RTSA
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggctggtggaggcaagaaggcaccgctgccggagtgccggtttggcttgtcgtgctat
cgcaagaacgtcaagcactttgacgagtactcacacccgtgcaagtacggcgcagcgtgc
tatcgccgcgatcccgaccatttccacaagtacacgcaccccaaggcatccaaaaccaca
acagcagtcgccgttgccgctgcgaaagccatcgccgacgatgacgatgacgcgcgcgtg
agcgacggtagcgactccgatggggacgcgcgccgacgaggcaagacaacagccaagcgc
aaggccggtggtgtcagtgatgaggacgacgacgacgatgacagcgacgatcgtggtgat
gcaccagctgcacgtcgcaagcccaagatagcgaaagccgctcgcaaggctgccagcgac
agtggcagcagcgacagtgacagcgatggcagtgggtcgaagacttcagcagccacagca
tcatcgatccgagatctcaaagtcgtgttcacgggtacatttgagtctgggattcggcgc
gttgtggagaacgaagcgtccaagctgggtgcgattgtgggctccagcgtgtcgtccaag
acggacctgctggtcattggcggcctcgtgcgtccctttggagccaaggaggatcgcgca
tcagaccttggtgtgcgcgtgatctttgagaaggagtggaacgacatggtgtttgcagag
tatcgtcgacgccgaacagcaaaaggagcaacgtcgacgaagaaggcgcacaagaaggaa
aagaaagcaactccccaccgcgacgcagatgatgatgatgatgatgaagatgatgatgag
gacgacaatgtggacggcaatgaggatgaggatgaggatgatgatgatggtaatggtgac
gacgatgacgctgatgctgatgctgatacacccaaaccactgcacaagctggaggatggt
gagagcgtggactacacgtcaccctcgggctcctcctacaagatcaagcgtaccggcgat
cactactactgcacgtgccctgcgtggcggaaccagagcgccccggtcaacgcgcgcaca
tgcaagcacctctgcgcctacctcggcgacgcgtttgagaaagcgcgtgttggcggcgtg
aagacggtgcctttgaaggcacgcggaacaccgaagccagacctgctcctggcccagcgt
tgggaggcgcgtgttgatccgactgactggcacatgagcgagaagctggatggcgttcgc
gcgtattggaacggaaaagagctcctgtcccgccttggcaacgcgtttgcagccccttcc
tggtttacaggcactctcccgcgggacatgacacttgacggggagctgttcatgggccgc
gggcgcttcaacgacaccgtcagcgtcgtgcgaaccgtcggcagcaagcggtggacagat
gtcacataccaggtgtttgattgtcccagtgagggcgcacgtgtgtttgaggagcgagtg
gaggctttgcagcgctggcattctgcgcagccgtccggccatgtgaagcatgtctccctc
gtccagcacacaagggtgcgggatgtgaagcacatggaggatgagctggagcgtgttgtg
gcgcgtcttgggggcgagggcctgatgctccgacagccaaagtcgacctacgcaaagaca
cgatcgtccacactgctcaaggtgaagcgcttctacgatgcggaggcgcgcgttcttgct
catgtgcccggcaaaggcagacacaagggcgcaatgggcgcgttggaggtggaaatggag
tgtggaaagaagttcaagattggcacggggttctcggacgcacagcgcagatccccgcca
aaggttggcgccatcatcacatacaagttccaggaactgaccccagatgggattccccgc
tttgcggcctttgttggcgagcgtgcagacgctgctggaccaaaggactacatcccaaag
cgcacgtcagcatga

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Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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