KEGG   Salpingoeca rosetta: PTSG_06968
Entry
PTSG_06968        CDS       T04136                                 
Name
(RefSeq) RNA polymerase II
Organism
sre  Salpingoeca rosetta
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 16072933
NCBI-ProteinID: XP_004992371
UniProt: F2UFB8
Position
Unknown
AA seq 1139 aa
MKGGSERDVVNESTDELLHHMHKDADNVAHPINNIEDKWRLLPSFLQLKGLVRQHVDSFN
HFVEIDIHNIVKANSKIVSDVNPRVYLEYTSIRVGEPVIQNGPFDDHDVTPMECRLRNTT
YAAPMHVNVRLSLSGEVRNYNDILIGRLPIMLRSKKCRLFKANDEQMAKMGECPLDPGGY
FIIGGTEKVILMQEQLSKNRIIVERDRHGEMSASVTSSSAERKTKTIINMKRGNFMLKVN
MLAEDVPLVVVLKAMGMTSDQEILQFIGADEQSMELFGPSLQQCAELEVFTQDQALRYLG
TKVRIPRREYGPSRRTKEDEARSILASVVLSHIEVRNFDMRPKCIYLCVMARRMIAAIRN
KSGGDDRDYYGNKRLELAGSLMALLFEDSFKTLNGRIKRELDHTFVRVTARAFDPAQIIR
ANPITQAINYAISSGNWNLKRFRMERAGVTSVLSRLSFIAALGMMTRITSQFEKTRKVSG
PRSLQPSQWGMLCPSDTPEGETCGLVKNLALMSYVTVDVDEAPLIRLAYNLGVEGLNLVN
GEEFSHEDTYVVFVNGTMLGVTRSPHHLVRAVRLLRRAGRINEFVSAYISASTRTVHIAS
DAGRVCRPYIIVEHGQPLVTPQQLRDLALGILHFDDFIRLGVVEYLDVNELNDSLIALYE
KDMCEETTHLEIEPFTVLGACAGLIPYPHHNQSPRNTYQCAMGKQAMGVIAYNYQRRIDT
LLYALMYPQRPLVKTKTIELIDFEKLPAGQVSCEARVCASGPRWYRRSRRIPQGQSKPPS
HTTTTSGVRFCTYATRVPGVCVRFATMRHRFTVAAAIHHVHLHPVSALSHQDVLVNKEVP
AGTVMEGNKRRTVYTPAPVKFKGAEGCDAYCDQVAVTSSSENYMIIKIRVRSTRIPELGD
KFSSRHGQKGVCGLIVNQEDMPFNDQGVCPDMIMNPHGFPSRMTVGKLMELVGGKAAVLS
GNFNYGTAFGGTPLEEMCETLVDHGYNYHGKEFLTSGITGEPLEAYIFFGPVYYQKLKHM
VMDKMHARATGPITLLTRQPTEGRSRQGGLRLGEMERDCLIGHGTSMLLLERLMVSSDAF
EVTACSKCGLLGYAGWCQYCKSSANVCKLELPYACKLLFQELQSMNIVPRLTLQHYSEQ
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgaagggtgggagtgaacgggacgtggtgaacgagagcacagacgagctcctgcaccac
atgcacaaggacgccgacaatgtggctcatccaatcaacaacattgaggacaaatggagg
ctgctgccttccttcttgcagctaaagggccttgtgcgccagcacgtggactcgttcaac
cactttgttgagattgatatccacaacatcgtcaaagccaacagcaagattgtctccgac
gtcaacccacgcgtttacctggagtatacgagcatccgtgtgggcgagcccgtgatccag
aacggcccctttgacgaccacgacgtcacgccaatggagtgccggctgcgcaacacgacg
tatgcggctcccatgcatgtgaacgtcaggctctccctcagcggcgaagtgcgcaactac
aacgacatcttgattggccggctgcccatcatgctgcggagcaagaagtgccgtctcttt
aaggccaacgacgagcagatggcgaagatgggcgagtgcccgctcgacccaggagggtat
ttcatcattggtggcacggagaaggtgattctcatgcaggagcagctcagcaaaaacagg
atcattgtcgaacgcgacagacacggggagatgtctgcctcggtcacgtcgtcctcggcc
gagcgaaagacgaagacaatcatcaatatgaagcgtggtaacttcatgctcaaggtgaac
atgcttgccgaggacgtaccgctggttgtggtgctcaaggcgatggggatgacgtccgat
caggagattctccagttcatcggcgcagacgagcaatcgatggagctgtttggaccgtcc
ctccagcagtgcgcagagctcgaggtcttcacccaggaccaggcactgcgctatcttggg
acaaaagttcgcattccacggcgcgagtacgggccgtcacgccgcacgaaggaggacgaa
gcacgctccattctcgcatctgttgtcctctcccacattgaggtccgcaactttgacatg
cggcccaagtgcatctacctgtgcgtgatggcacgtcgcatgatcgctgcaatccgcaac
aagagcggaggtgacgaccgcgactactacggcaacaagcggctggagctcgccggatcc
ctcatggccctcctcttcgaagactccttcaagacactcaacggacggatcaagcgagag
cttgaccacacgtttgtgcgcgtgacggcgcgagcgtttgatccggcgcagattatccgc
gccaacccaatcacccaggcgatcaactatgcgatttcgagcggcaactggaacctgaag
cgcttccgcatggagcgtgccggtgtcacgtcggtcctgtcgcgcctgtcgttcatcgct
gcactcggcatgatgacacgcatcacctctcagtttgagaagacacgcaaagtgagcggc
cctcgctccctccagccgtcccagtggggaatgctctgcccaagcgatacgcccgagggc
gagacgtgcggtcttgtgaagaatcttgcgctcatgtcgtacgtgactgtcgacgtcgac
gaagccccgctcatcaggctcgcgtacaaccttggcgttgaggggctgaatcttgtcaac
ggggaggagttttcgcatgaagacacatatgtcgtgtttgtcaacggtaccatgctcggc
gtcacgcgcagcccacaccaccttgtgcgagcggtgcggttgctgcgtcgtgccggccgc
atcaacgagtttgtgtcggcgtacatcagcgcctcaacccggactgtccacatcgccagc
gacgcaggcagagtctgcaggccgtacattattgtggagcacgggcagccgctggtgacg
ccgcagcagctgcgcgacctcgctctcggcatcctccactttgatgacttcatcagactc
ggggtggtcgagtaccttgacgtgaacgagctgaacgacagcctgattgcgctgtacgag
aaggacatgtgcgaagagacgacgcatcttgagattgagccgttcacagttctgggcgcc
tgtgcgggcctcattccatatccgcaccacaaccagtccccgcgaaacacctaccagtgc
gccatgggcaagcaggcaatgggtgtcattgcctacaactaccaacgcaggatcgacacg
ctgctgtatgcgctcatgtatccgcagcggccgctggtgaagacaaagaccattgaactc
atcgactttgagaagctgccggctgggcaggtcagctgtgaagcccgggtttgcgcgtct
ggaccgcgatggtatcgtcgctcccggcgaatccctcaaggacagagtaagcccccctcc
cataccaccaccacctctggtgttcgcttctgcacatatgccacgcgtgtgcctggcgtg
tgcgtgcgttttgcgaccatgcgtcaccgattcactgttgctgctgccattcaccatgtg
cacctccaccctgtctccgccttgtctcatcaggatgtgctggtgaacaaggaggtgcct
gctgggacggtgatggaaggcaacaagcgccgcacggtgtacacgccggcaccagtcaag
ttcaagggtgccgagggctgtgatgcatactgcgaccaggttgctgtgacatcatcatcg
gaaaactacatgatcatcaagattcgtgtgcgcagtacgcgtatccctgagcttggcgac
aagttcagcagccgtcacgggcagaagggcgtgtgcggtctcattgtgaaccaggaggac
atgccattcaacgatcagggggtgtgtcccgacatgatcatgaatccacacgggtttccg
tcgcgtatgaccgtcgggaaactgatggagcttgttggcggaaaggcggctgtcttgtcc
ggtaacttcaactacggaaccgcttttggcggcaccccgctcgaggagatgtgcgagacg
ctggttgatcacgggtacaactaccacggcaaagagtttctgacctccggcatcactggc
gagccgctggaggcgtacatcttcttcgggcccgtctactaccagaagctcaagcacatg
gtcatggacaagatgcacgcacgtgcgacgggtcccatcacgctgctgacgcgccagcca
acggagggtcgatcgagacagggtggcctgcgccttggcgagatggaacgtgattgcctc
attggtcacggcacgagcatgctgctgctggaacgcctcatggtctcctcagatgccttt
gaggtgaccgcctgctccaagtgcggccttctcggctacgctggatggtgccagtactgc
aaatcatcagccaacgtatgcaagcttgagctgccgtacgcgtgcaagctgctgttccag
gaacttcagagcatgaacattgtgccgcgcctgacactccagcactacagcgagcaatag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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