KEGG   Salpingoeca rosetta: PTSG_09623
Entry
PTSG_09623        CDS       T04136                                 
Name
(RefSeq) polymerase
  KO
K03505  DNA polymerase delta subunit 4
Organism
sre  Salpingoeca rosetta
Pathway
sre03030  DNA replication
sre03410  Base excision repair
sre03420  Nucleotide excision repair
sre03430  Mismatch repair
sre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTSG_09623
   03410 Base excision repair
    PTSG_09623
   03420 Nucleotide excision repair
    PTSG_09623
   03430 Mismatch repair
    PTSG_09623
   03440 Homologous recombination
    PTSG_09623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sre03032]
    PTSG_09623
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_09623
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    PTSG_09623
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      PTSG_09623
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     PTSG_09623
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 16070602
NCBI-ProteinID: XP_004990050
UniProt: F2ULI9
Position
Unknown
AA seq 191 aa
MSLFEQYKSERGAEGRKASAARPSSSSLSSSPSASAASSSSPAGSLDAFARNHQRAKQAA
FHQGKTTSMYGKAKVIAGGHKNQSSSSSSSYGLRKAQHLKAKTSPPTGAAGQQGKVRRSV
AKPTLQLEQHLTVLRDFDLNSEFGPCVGITRMERWKRAQAFGLNPPLKIKQILEQHPGND
DYQQSLWYKDV
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagtttgtttgagcagtacaagagtgagaggggcgcggagggccgaaaggccagcgct
gctcgcccttcttcttcgtcgttgtcatcttctccttcggcttctgcggcgtcgtcatca
tcgccggcgggttcgttggacgcgtttgcgaggaaccaccagcgcgcaaagcaagctgcg
ttccaccaaggcaagacaacgtccatgtacggcaaagccaaggtgattgctggcggacac
aagaaccaaagcagcagcagcagcagcagctatggtctgcgcaaggcacagcacctgaaa
gccaaaacgtcgccaccaacgggagctgctgggcagcaaggtaaggtgcggcgctctgtg
gccaagcccacgttgcagctggaacagcacctgacggtgctgcgtgatttcgatctcaac
tcggagtttgggccttgcgtcggcatcacgcgcatggagcggtggaagcgtgcacaagcc
tttgggctcaacccgcccttgaagattaagcagatcctggaacaacacccgggcaacgac
gactaccaacaatcgctctggtacaaggacgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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