KEGG   Serratia plymuthica 4Rx13: SOD_c02450
Entry
SOD_c02450        CDS       T02710                                 
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
srl  Serratia plymuthica 4Rx13
Pathway
srl00730  Thiamine metabolism
srl01100  Metabolic pathways
srl01240  Biosynthesis of cofactors
Module
srl_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:srl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    SOD_c02450 (thiC)
Enzymes [BR:srl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     SOD_c02450 (thiC)
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: AGO53267
Position
complement(277667..279610)
AA seq 647 aa
MSNVKKPRARKEQREEAQQFIDTLQGVSFPNSHRIYLQGSRSDVRVPMREIQLSPTLIGG
DKDNPQYEQNEAIPVYDTAGPYGDPQSELDVHRGLAKLRAGWIEERGDTEALKGVSSGFT
QQRLADEGLDHLRFEHLPLPRKAQPGKCVTQLHYARAGIVTPEMEFIAIRENMGRERIRG
EVLRHQHPGQSWGANLPQNITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNA
NIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQ
ALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSI
MAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGE
LTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTS
GIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDN
AMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVR
DYAAAQEAAKPIEVQLTGMEKMSAEFRSRGSELYHSVGNLQEEMNND
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgtctaacgttaaaaaaccgcgcgcccgtaaagaacagcgcgaagaagcccagcagttt
atcgacactctgcaaggcgtatcctttcccaattcacaccgtatctatctgcaaggctcg
cgcagcgatgtgcgggtcccgatgcgtgaaatccagctcagcccgacgctgattggcggt
gacaaagacaacccgcaatacgagcagaacgaagctatcccggtatatgacaccgccggc
ccgtacggcgatccgcaatccgagctcgatgtgcatcgcggcctggcgaaactgcgcgcc
ggctggatcgaagaacgtggcgataccgaagccctcaaaggcgtcagttcagggttcact
cagcagcgtctggcagacgaagggttggatcatctgcgcttcgaacatctgccgctgccg
cgcaaggcgcagccgggcaaatgcgtcacccagttgcactatgctcgcgccggcatcgtc
accccagaaatggaattcatcgccatccgcgaaaacatgggccgcgagcgtatccgcggc
gaagtgctgcgccaccagcatcccggtcaaagctggggcgccaacctgccgcaaaacatc
acgccggaattcgttcgccaggaagtggccgccggccgcgccatcattcccgctaacatc
aaccacccggaatccgaaccgatgatcatcggccgtaacttcctggtgaaggtcaatgcc
aatatcggcaattcggcagtgacttcgtcgatcgaagaagaagtggagaagctggtgtgg
tcaacccgctggggcgcagacaccgtgatggatttgtccaccggccgctatatccacgaa
acccgtgaatggatcctgcgtaacagcccggtgccgatcggtacggtgcctatctatcag
gcgctggaaaaagtgaacggcgtggccgagaacctgacctgggaaatgttccgcgatacg
ctgctggagcaggcggagcaaggcgtcgactacttcaccatccacgccggtgtgctgctg
cgttatgtgccgatgaccgccaaacgcctgaccggcatcgtctctcgtggcggttcgatc
atggccaagtggtgcctgtcgcatcatcaggaaaacttcctgtatcaacacttccgcgaa
atttgtgaaatctgcgccgcctacgacgtatcgctgtcgctgggtgacggcctgcgcccc
ggttcgattcaggacgccaacgacgaagcgcagttcgctgagctacacacgctgggcgaa
ctgacaaaaatcgcctgggaatatgacgtgcaagtgatgatcgaaggcccaggtcacgtg
ccgatgcagatgatccgccgcaacatgaccgaagagctggaacactgccacgaagcgccg
ttctataccttaggcccattgaccaccgatatcgcccccggttatgaccacttcacctcc
ggcataggggccgcgatgatcggctggttcggctgcgccatgctgtgctacgtaacgccg
aaggaacacctgggcctgccgaacaaagaagacgtgaagcagggattgatcacctacaag
atcgccgcccacgctgctgacttggccaaaggccacccaggtgcgcaaatccgtgataac
gccatgtccaaagctcgcttcgaattccgctgggaagatcagttcaatctggcgctcgat
cccgccaccgcccgtgcctatcacgacgaaaccctgccgcaggagtccggcaaaatcgcc
catttctgctcaatgtgcgggccgaagttctgctcgatgaagatctcgcaagaggtgcgc
gactacgccgccgcgcaggaagcggccaagccgatagaggtgcagctaaccggtatggag
aagatgtcggccgagttccgttcacggggcagcgagctgtaccacagcgtcggtaacctg
caggaggagatgaacaatgactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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