KEGG   Serratia plymuthica 4Rx13: SOD_c41130
Entry
SOD_c41130        CDS       T02710                                 
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADp(+)] GabD
  KO
K00135  succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
Organism
srl  Serratia plymuthica 4Rx13
Pathway
srl00250  Alanine, aspartate and glutamate metabolism
srl00310  Lysine degradation
srl00350  Tyrosine metabolism
srl00650  Butanoate metabolism
srl00760  Nicotinate and nicotinamide metabolism
srl01100  Metabolic pathways
srl01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:srl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    SOD_c41130 (gabD)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    SOD_c41130 (gabD)
   00310 Lysine degradation
    SOD_c41130 (gabD)
   00350 Tyrosine metabolism
    SOD_c41130 (gabD)
  09108 Metabolism of cofactors and vitamins
   00760 Nicotinate and nicotinamide metabolism
    SOD_c41130 (gabD)
Enzymes [BR:srl01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.16  succinate-semialdehyde dehydrogenase [NAD(P)+]
     SOD_c41130 (gabD)
    1.2.1.20  glutarate-semialdehyde dehydrogenase
     SOD_c41130 (gabD)
    1.2.1.79  succinate-semialdehyde dehydrogenase (NADP+)
     SOD_c41130 (gabD)
SSDB
Motif
Pfam: Aldedh AcnX_swivel_put
Other DBs
NCBI-ProteinID: AGO57062
Position
complement(4647745..4649199)
AA seq 484 aa
MKLNNPELLRSQCLINGEWCDALSGQREAVINPATGAELASIPLVSEEETQQAINAAQLA
QQGWKQLTAKQRSVLLLAWADKVLAAQEDLAQLMTAEQGKSLAEARGEVAYAASFITWFA
EEAKRVDGAVLQAPLASQRLVVVKQPIGVCAAITPWNFPAAMITRKVAPALAAGCAMIVK
PAEQTPLTALALAKLAQDAGIPPGVLQVVTGDAAQVGKVLCDSPVVRKLSFTGSTEVGRI
LMAQCAPTIKKLSLELGGNAPVIVFDDANLDAAVAGIMASKFRNSGQTCVCANRIYVQDG
IYDRLVDKLVAAVEQLKVGDGSHEGTTQGPLIDQDAVDKVQSHIDDALIKGAQIAIGGQP
HELGRTFFQPTVVTGVTQKMRFAREETFGPVAPLFRFHDEAEAIAMANDTEFGLAAYLFT
QSASRQWRVPEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSRYGIEEYLELKYLCI
DVSC
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaaactgaataatcccgagctgctgcgcagccagtgcctgattaacggtgagtggtgc
gacgcgttgagcggccagcgtgaagcggtcatcaacccggcgaccggtgctgagctggca
agcattccgttggtcagcgaagaagaaacgcagcaggcgattaacgcggcgcagttggcg
cagcagggctggaaacagctgaccgccaaacagcgctccgtgctgttgctggcctgggcc
gacaaggtgctggcggcccaggaggatttggcgcagctgatgaccgccgagcagggtaaa
tcgctggcggaagcgcgcggtgaagtcgcctatgccgcttcgtttattacctggttcgcc
gaagaggccaagcgtgtcgacggtgccgtgttgcaagcgcccctggcctcgcagcgcctg
gtggtagtgaaacagccgatcggcgtttgcgcggcgatcacgccgtggaacttcccggcg
gcgatgatcacccgcaaggttgcgccggcgttggctgcgggctgcgcgatgatcgtcaaa
ccggccgaacagacgccgctgaccgcgttggcgttggcgaagctggcgcaggatgccggc
attccgccaggcgtgttgcaggtggtgaccggcgacgcggcgcaggtgggcaaggtgctg
tgcgacagcccggtggtgcgcaaactgagctttaccggttcgaccgaggtcggccgcatt
ctgatggcgcagtgcgcaccgacgattaaaaagttgtcgctggagctggggggcaacgcg
ccggtgatcgttttcgacgatgccaatctggacgcggcggtggcgggcattatggcctcc
aagttccgtaacagcggccagacctgcgtctgtgccaaccgcatctacgtgcaggacggc
atctacgatcgtttggtggacaagttggtggcggcggttgagcaactgaaggtcggtgac
ggcagccatgaaggcaccacccaggggccgctgatcgaccaggacgcggtggataaagtg
cagagccacattgacgatgcgctgattaaaggcgcgcagattgctatcggcgggcagccg
cacgagctgggccgaaccttcttccaaccgacggtggtgaccggcgtgacgcaaaaaatg
cgcttcgcccgggaagaaacctttggcccggtggcgccgctgttccgttttcatgatgaa
gcggaagcgatcgccatggccaacgacaccgaattcggtctggccgcttatctgtttacg
cagagtgcctcgcgccagtggcgagtgccggaagcgctggaatacggcatggtcggcatc
aacaccgggctgatctccaatgaagtcgcgccgtttggcggtgtgaagcagtcaggactc
ggacgtgaaggatcgcgttacggcattgaagaatatctggagctgaaatacctgtgtatc
gatgtgagctgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (7)   
   KEGG MODULE (3)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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