KEGG   Streptococcus suis ST1 (serotype 1): SSUST1_0569
Entry
SSUST1_0569       CDS       T02125                                 
Name
(GenBank) exoribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
srp  Streptococcus suis ST1 (serotype 1)
Pathway
srp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SSUST1_0569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srp03019]
    SSUST1_0569
   03016 Transfer RNA biogenesis [BR:srp03016]
    SSUST1_0569
Enzymes [BR:srp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     SSUST1_0569
Messenger RNA biogenesis [BR:srp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SSUST1_0569
Transfer RNA biogenesis [BR:srp03016]
 Prokaryotic type
  tRNA degradation factors
   SSUST1_0569
SSDB
Motif
Pfam: RNB OB_RNB CSD2 S1 RNase_II_C_S1 CSD FaeA
Other DBs
NCBI-ProteinID: AER20962
Position
570976..573345
AA seq 789 aa
MKNEIINYIKEVGPVTMDQLADQFGASSAKSFTDLVKLVSSMEGSRQLVFDNAGWIALPA
PKVSKNKVTLQGIFRAHKSGFGFVTIDEEEDDLFVSRDDVNFAIEGDRVEIAIKKVADRL
KGTAAEAEVIDILEHSLKTAVGLIVFDEDKPEYAGYIKSKNQKIAQKIYIKKSPLVLTGT
EILKVDIEAYPNKKRDHFVATIRDVVGHKDDVGIDVLEVLESMDIVSEFPDEVLAEANRV
PESPSEKDFEGRLDLRDEIIFTIDGADAKDLDDAVHIKQLKNGNLELGVHIADVSYYVTE
GSALDREAVKRGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDRKGKVVKH
WIGQTVIKTTFRMTYSDVNDMIAGNKEKLATYKAIVPSVELMVKLHETLETMRYKRGALN
FDTTEAKIIVNKDGLPVDIQLRQRGIAERMIESFMLAANECVAEHFAKLDLPFIYRIHEE
PKSDKLQKFIDYATSFGLTVYGTASSISQDALQDLMERVKDEPYADVLNMMLLRSMQQAR
YSEHNHGHYGLGAEFYTHFTSPIRRYPDLLVHRMVREYGHNPVEKAEHFEQVILELAKSS
SSLERRAIEAEREVEAMKKAEFMQEFVGQEFDGVVSSVVKFGLFVELPNTVEGLIHITNL
NEYYQFHERTLTLQGEKSGRVFRVGQPIRIKLTRADKMTGEIDFAHVPSELDIVEKALKA
KRRTASHSNRDRDDRSGRGRGKHHKQEAAGRDSGRHKSGKDHKLKSGKKDKKKKPFYKEV
AKKNKKKRR
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgaaaaacgaaattataaactatattaaagaagttggtcctgtgaccatggaccagctg
gcagatcagtttggagccagttctgctaagagctttacagatttggtcaagctggtttcg
agtatggaaggcagtcgtcaacttgtctttgacaatgctgggtggattgctttgccagct
ccaaaagtgtccaaaaacaaggtaaccttacagggtatttttcgtgcccacaagtcaggc
tttggctttgtgaccattgatgaagaggaagatgacctctttgtcagccgtgacgatgtt
aactttgctatcgaaggtgacagagttgaaattgcaattaaaaaggttgcagatcgtctc
aagggaactgccgcagaagcggaagtcattgatattttggaacatagcctgaaaacagcg
gtgggcttgattgtttttgacgaagacaagccagaatatgccggctacatcaagtctaaa
aaccagaaaatcgctcagaagatttacatcaagaagtcacctctggtattgaccgggacg
gaaatcctcaaggttgatatcgaggcttatcccaataagaaacgggaccactttgttgcg
accattcgggacgtggtgggccacaaggatgatgtgggaatcgatgtcttggaagttttg
gaatccatggacatcgtgtcggagttccctgatgaagtcttggcggaggccaatcgggta
ccagaaagtccgtctgagaaggactttgaaggacgcttggacctgcgggatgaaatcatc
ttcactatcgacggtgcggatgccaaggacttggacgatgcggtccatatcaagcagctc
aagaacggcaatctggaactgggtgtccatatcgctgatgtcagctactatgtgaccgaa
ggctctgccttggaccgggaagctgtcaagcgtggaacgtctgtctatgtgaccgaccgt
gtggtgccaatgttgccagaacgcctgtcaaacggtatttgctcccttaatccaaacgtg
gatcgcctgacccagtcggctattatggaaattgaccgcaagggcaaggtagtcaagcac
tggattggccagacggtcatcaaaaccaccttccgcatgacctattccgatgtcaatgat
atgattgctggtaacaaggaaaagcttgctacatacaaggcaatcgtgccaagtgttgag
ctcatggtcaaactccatgagacgttggaaaccatgcgctataagcgtggggctctcaac
tttgacacgacagaagctaaaatcatcgtcaacaaggatggtctgccagtcgatattcaa
ctgcgccagcgaggcattgccgagcggatgattgagtccttcatgctggctgccaatgag
tgcgttgctgagcattttgccaaactggacctgcctttcatctatcggatccacgaggag
cctaagtcagacaagctgcaaaagttcatcgactatgcgaccagctttggtctgacggtc
tatggtacggccagctctatcagccaggacgcccttcaagacctcatggagcgggtcaag
gatgaaccctatgcggatgtcctcaacatgatgttgctgcgttctatgcagcaggcacgt
tactcagagcacaaccacggccactacggactgggtgcggagttctacacccacttcacc
agtcctatccgccgctatcccgacctgctggttcaccgtatggtacgggaatatggtcac
aatcctgtggaaaaagcagagcattttgagcaggttattcttgagcttgccaagtcttcg
tccagtttagaacgccgtgccattgaggcagagcgggaagtcgaagccatgaagaaggca
gagttcatgcaagaatttgttgggcaagagtttgatggtgtcgtgtctagcgtggtcaag
tttggtctttttgtcgagttaccaaatacggttgaaggtctgattcatatcaccaacctc
aacgaatactaccagttccacgagcggactctgaccttgcagggtgagaaatcaggtcgg
gtcttccgtgttggtcagccaattcgtatcaagctaacgcgggcggacaagatgacaggg
gaaatcgattttgcccacgtgccgtccgagctggatattgtggaaaaagctttgaaagcc
aagcggagaactgctagtcactccaaccgtgaccgtgatgatcggtcagggcgaggacgg
ggcaagcaccacaaacaagaagctgctggtcgcgacagcggacgtcacaagtctggaaaa
gaccataagttaaaaagtggtaaaaaagacaagaaaaagaaaccattttacaaagaagtg
gccaaaaagaacaagaagaaaaggagatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system