KEGG   Serratia plymuthica AS9: SerAS9_4409
Entry
SerAS9_4409       CDS       T01503                                 
Name
(GenBank) Uracil-DNA glycosylase superfamily
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
srr  Serratia plymuthica AS9
Pathway
srr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SerAS9_4409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srr03400]
    SerAS9_4409
Enzymes [BR:srr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     SerAS9_4409
DNA repair and recombination proteins [BR:srr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SerAS9_4409
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AEF47503
Position
complement(4761715..4762203)
AA seq 162 aa
MNLLAPNLRVVFCGINPGLSSAHQGYPFANGSNRFWKVLHQAGFTQRQLAPEQWQQLQDT
GCGITALVARPTVAASEVTREELRSGGEALKDKILQFQPRALAVLGKQAFSSAFGVKNAP
WGRQEMTIGKTEVWVLPNPSGLNRATLEQLTESYRELFLALE
NT seq 489 nt   +upstreamnt  +downstreamnt
atgaatcttttggcgccaaacttgcgggtggtgttttgcggcatcaatcccggcctttcc
tccgcccatcagggctatccctttgccaatggcagcaaccgtttctggaaggtgctgcat
caggccggtttcacccagcgccaactggcgccggagcagtggcagcagttgcaggatacc
ggctgcggcatcaccgctttggtggcgcgcccgacggtcgcggccagcgaagtgacgcgt
gaagagttgcgcagcggcggtgaggcgttaaaagacaaaattctgcaattccagccgcgt
gcattggcggttctgggtaagcaggcgttcagcagcgccttcggggtgaaaaatgcgccc
tgggggcggcaggagatgacgatcggcaaaaccgaggtgtgggtattacctaatcccagc
gggttgaaccgtgccacgctggagcagcttacggagagctaccgcgagctgttcctggcg
ctggagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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