KEGG   Segniliparus rotundus: Srot_0565
Entry
Srot_0565         CDS       T01238                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
srt  Segniliparus rotundus
Pathway
srt03420  Nucleotide excision repair
srt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:srt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Srot_0565
   03430 Mismatch repair
    Srot_0565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srt03400]
    Srot_0565
Enzymes [BR:srt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Srot_0565
DNA repair and recombination proteins [BR:srt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Srot_0565
   MMR (mismatch excision repair)
    Other MMR factors
     Srot_0565
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2
Other DBs
NCBI-ProteinID: ADG97047
UniProt: D6ZCK5
Position
547146..550334
AA seq 1062 aa
MIGPRLLAQAIGAPVPSEEQEQVIGAPLASSAVLAGAGSGKTETVAARVVWLIANGLVEP
EHVLGLTFTRSAARGMLARVRARLAGFAASPLLERVDPTGRLGELLENSEPQVMTYDAYA
GELVSRWGLLLGASATEAAAGGRVVLSEAGMWQLAYETVANWESLLSVDRGVAGVAEAVT
ALGRRMAEQLAAPDRVLAAAEELARLVRTLPKGPRQRAEPSLELREAVAVQQARAELLGV
VARMQDRLRSSGAVDFATQTARAAELAQRFPQVRAEECAAHRVVLLDEYQDTGHAQRILL
RALFGPPRIGGAARGGGANGAAVTAVGDPHQAIYAWRGASSGNLAAFQADFGAPEALTLM
TSWRNPASVLDLANLTAAPLRRAGIAVPELAARPDAPAGEVRVALFDDAAAERAWIAERL
RHAAQTSPTRPSMAVLVRRNADAVPVAEALTAAGLEAQVIGLGGLLATPQVAELVAMLEL
IADPGASAAALQVLTSPRWRIGARDLAALAQRAQELGPGRARPLAPRDPAELVEQLTAVL
ADDGSERAGLGDALADLGDQGRYSAAGYARLALLAGELDRLRGQLARPLPEFVTLVERVT
GLAVEADAQAKERLSAFASVVAEHAKAAELLGGSASLAGLVGYVRLAETVERGLPVGEVA
PDPRKVQVLTVHAAKGLEWDVVAVAHLCAGVFPTGRARSTWIGALAELPPEDLGPLTSSQ
DRAELQEMLRAEREAAKELAGEEERRLAYVAVTRAKQTLLLSGHWLAEGAERALGPSAFL
VEWRDALVAAGGSPDMWAESPALDHMRPASGESEGALWPPDPLLGRRAQTQRGAERVRAA
LADAVPLPRPEGPDAELYEAAAALVAERAAAAEARSVERAGLTVSDVVGIAVDPAGFERE
RARRGPRPPAPEAQAGIGFHEWVRRWYLSEELVGLDELPGAADDDDAVASEKLRQKFLES
PWAARSPVAVETPFELNLDGVLVRGRIDAVFAEPGGGYVVVDWKTGRADLRRAKAQLSVY
RLAWQRLTGAAQVAGAVHEVATGVTRTFDDLYTAEELAALLR
NT seq 3189 nt   +upstreamnt  +downstreamnt
atgatcggtccgagattgctcgcccaagcgatcggcgcgcctgtgccgagcgaggagcaa
gagcaggtgatcggggcgccgctcgcatcgtccgcggtgctcgccggggccgggtcgggc
aagaccgagaccgtcgcggcccgggtggtgtggttgatcgccaacggcctggtggagccg
gaacacgtgctcggcctgaccttcacgagatccgccgcgcggggcatgctcgcccgggtc
cgcgcgcggctcgcgggcttcgcggcttcgccgctcctggagcgcgtcgaccccaccggg
cgcctcggggagcttttggagaactccgagccccaggtgatgacatatgacgcctatgcg
ggggagctggtctcgcgttggggcttgctcctgggggcaagcgcgaccgaagccgcggcg
ggcgggcgggtcgtgttgtccgaagcagggatgtggcagttggcgtacgagacggtcgcg
aactgggagtcgttgctctcggtggacaggggcgtcgcaggcgtcgcggaggcggtcacc
gcgttgggcaggcggatggcggagcagctcgccgctccggaccgggtcctcgccgccgcc
gaggagctcgcgagactggtgcggacattgccgaaagggccgaggcagcgcgccgagccc
tcgctcgaattgcgcgaagccgtggccgtgcagcaggctcgggcggaactgctgggcgtg
gtcgcgcggatgcaggaccggttgcgttcgagcggggcggtggacttcgcgacgcagaca
gcgcgcgccgccgaactcgcgcagcgattcccccaggtccgcgccgaggagtgcgcggcg
caccgagtggtgctgctcgacgagtaccaggacaccggccatgcccaacggatactgctg
cgcgcgctgttcggcccgccccgcatcggcggggcagcgcggggcggcggggcgaacggg
gcagcagtgaccgcggtcggcgacccgcaccaggccatttacgcctggcgcggcgcgtcc
tcgggcaacctcgcagccttccaagccgacttcggagcacctgaggcgcttacgctcatg
acaagttggcgcaaccccgcgtcggtgctcgacctcgcgaacctcaccgccgcgccgctg
cgccgcgccgggatcgccgtccccgaactcgccgcccgccccgacgcgcccgccggcgag
gtgcgggtggcgctgttcgacgacgcggccgccgaacgggcctggatcgcggagcgtctg
cgccacgcggcacagacctcgccgacgaggccttccatggcggtgctggtccgccgcaac
gccgacgcggtgccggtcgccgaggctctcacggcggcgggccttgaggcgcaggtgatc
gggttgggcgggttgctcgccaccccgcaggtcgccgaactcgtggcgatgttggagctg
atcgccgaccccggagcctccgccgcggcgttgcaggtgctcacgagcccgaggtggcgg
atcggagcccgcgacctcgccgcgctggcgcaacgggcgcaggagctaggacctgggcgg
gcgcggccgctcgccccccgcgatcctgccgagctggtcgaacagctcaccgccgtgctc
gccgacgacgggtctgaacgtgccgggttgggcgacgccctcgcggatttgggcgaccaa
gggcggtactccgccgccggatacgcgcgcctcgccctgctcgcaggcgaactcgaccgc
ttgcgcggacagctcgcccgaccgctgccggagttcgtgaccttggtggagcgcgtgacc
gggcttgccgtcgaagcggacgcgcaggcgaaagaacggctctcggccttcgcgtcggtc
gtcgcagagcacgccaaagccgccgagctgctcggcggctcggcgagcctcgcgggcctc
gtcggctatgtgcgcctcgccgagacggtcgagcgcgggctgccggtcggcgaggtcgcc
cccgacccccgcaaggtgcaggtgttgacggtccacgcggccaaaggcctggaatgggac
gtcgtcgcggtcgcgcacctctgcgcaggagtgttcccgacgggccgggcccgctccacc
tggatcggcgccctcgccgagttgccgcccgaggacctcggcccgttgacctcgtcgcag
gaccgggcggagctgcaagagatgctgcgcgcggagcgcgaggcggccaaggagctcgct
ggtgaggaggagcgccggctcgcgtatgtggcggtgacccgcgccaagcagaccctgctg
ctctccggccattggctggccgaaggggccgagcgcgcgctcggcccctcagcctttctc
gtcgagtggcgcgacgccctcgtcgccgcaggcggctcgcccgacatgtgggccgaatcg
cccgcgctcgaccacatgcgtcctgcgtccggcgaatcagaaggcgcgctgtggccgccg
gaccccctcctcggtcgtcgagcccagacgcaacggggcgcggagcgtgtgcgggcggcg
ttggcggacgccgtcccgcttccgcgaccagaaggccccgacgccgagctgtatgaggcc
gccgccgcgcttgtcgccgaacgcgccgccgcggcagaggcgcgatcagtcgagcgggcc
gggctcaccgtcagcgatgtcgtcggcatcgctgtcgatcccgccgggttcgagcgcgag
cgcgcccggcgcggtccccgcccgcctgcgcccgaggcgcaggcggggatcggcttccac
gaatgggtgcgccgctggtacctctccgaggagcttgtcggtttggacgagctgcccggc
gcggcggacgacgacgatgcggtcgcgagcgaaaaattgcggcagaaattcctcgaatcg
ccctgggccgcgcgcagcccggtggctgtggagaccccgttcgagctcaacctcgacggg
gtgctggtgcgtgggcgcatcgacgcggtgttcgccgagccaggcggcggttatgtggtg
gtggactggaagaccggccgggccgatctccgcagggcgaaggcgcagttgtcggtgtat
cggctcgcgtggcagcggctcaccggagccgcgcaggtcgcgggcgcggtccacgaggtg
gccaccggggtgacgaggaccttcgacgatctctacacagctgaagagctcgcggcgctg
ctgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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