KEGG   Segniliparus rotundus: Srot_1432
Entry
Srot_1432         CDS       T01238                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
srt  Segniliparus rotundus
Pathway
srt03030  DNA replication
srt03430  Mismatch repair
srt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Srot_1432
   03430 Mismatch repair
    Srot_1432
   03440 Homologous recombination
    Srot_1432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:srt03032]
    Srot_1432
   03400 DNA repair and recombination proteins [BR:srt03400]
    Srot_1432
Enzymes [BR:srt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Srot_1432
DNA replication proteins [BR:srt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Srot_1432
DNA repair and recombination proteins [BR:srt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Srot_1432
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: ADG97895
UniProt: D6Z7G5
Position
1426146..1429685
AA seq 1179 aa
MSDSFVHLHNHTEYSLLDGHAQVDAMFQEAARLKMPAVGMTDHGNMWGSAEFYKASKKHG
VKPIIGIEAYLAPSSRFSTKREFWGEPGQRSDDVSGSGAYTHMTMVAKDAQGLRNLMKLS
SLASFEGQLGKWPRMDAELLAEHGRGVIATTGCPSGEVQTKLRLGQFEAACEAAGRFQEI
FGKENFYLELMDHGIDIERRVREDLLRLGERLKIPPLATNDCHYVRQEHARGHEILLCVQ
TGKTMSDPGRFKFDGDGYYLKPADMMRAAWDSEVPGACDNTLLIAEQVGSYDEVWEVRDR
MPVFPVPDGEDQNSWLRHEVDRGLQRRFPDGVSDEYRARAAFELDVIKQKGFPSYFLIVG
DLIAYARSVGIRVGPGRGSAAGSLVSYALGITNLDPIKHGLLFERFLNPERPSAPDIDID
FDDRRRGEMIRYASEKWGADRVAQVITFGTIKTKAALKDSARVLHGQPGFAIADRITKAL
PPAIMAKDIPLSGITNPEHERYKEATEIRELIANDPDVAKIYETALSLEGLIRNAGVHAC
AIIMSNEPLIETIPLWKRPQDGAIITGWDYPSCEDIGLLKMDFLGLRNLTVIGDAIENIR
QNRGVELDLENAPLDDPATFALLSRGETLGVFQLDGGPMRDLLRRMKPTGFGDIVAVLSL
YRPGPMGVNAHNDYADRKNGRQQIKPIHPELEEPLKEILSETYGLIVYQEQIMFIAQKVA
GYSMGKADALRKAMGKKKLEVLQAEYEGFSQGMRGNGFSEAAVKALWDTVLPFADYAFNK
SHAACYALVAYWTGYLKANYPAEYMAALLTSVGDDKDKAAVYLADCRKMGITVLAPDVNK
SRVDFAAVGEDILFGLSGVRNVGVGLVESIIRTRESEGAFTSFSDYLAKADITACNKKAV
ESLIKAGGFDALGHPRKGLYLVHTEAVDAVMSTKKAEAQGQYDLFSDFFESGSPELTATF
EVQIPDEEWDMKQKLALEREMLGLYVSGHPLAGLEQALAAATDVSIRSILDGEVKDGTNV
KVGGVLSGVNRRVNKNGAPYASAQLEDLVGGIEVFLFPQNYVAYGEEFVEDAVVLINARV
NFRDDRIALIASDVRQAELTPQKAANTLRLSVAESWCNPDSVAQLREILERNPGPTQVLL
DLHRGGKALSFQLDEALTVMPSPELYGDLKALIGPGCLG
NT seq 3540 nt   +upstreamnt  +downstreamnt
ttgtcggattcgtttgtgcacctgcacaaccacaccgaatactccttgctggacggacac
gcccaggtcgacgcgatgttccaagaagccgccagactcaagatgcccgctgtcggcatg
acggaccacgggaacatgtggggttcggcagagttctacaaggcgtcgaaaaagcatggg
gtcaaaccgatcatcggcattgaggcgtatctggcgccgtcctcgcgtttctccacgaaa
cgcgagttctggggcgagccgggccaacgctccgacgatgtgtccggctccggggcctac
acccatatgactatggtcgcgaaagacgcccagggccttcgcaacctcatgaagctctcc
tcgctcgcctctttcgaaggacagttgggcaaatggcctcggatggacgcggagctcctc
gccgagcacggcaggggcgtcatcgccaccaccggatgcccctccggcgaagtgcagacc
aaactccgcctcggccagttcgaggctgcctgcgaggctgcggggcggttccaggaaatc
ttcggcaaggagaacttctacctcgagctcatggaccacggcatcgacatcgagcgccgg
gtccgcgaggacctgctgcgcctgggcgagcggttgaagatcccgccgctcgccacgaac
gactgccattatgtgcggcaggagcacgcccgaggccacgagatcctgctgtgcgtgcaa
accggcaagaccatgtccgaccccggccggttcaaattcgacggggacggctattacctc
aagccggccgacatgatgcgcgccgcctgggacagcgaggtgccgggggcgtgcgacaac
accttgctgatcgcggagcaggtgggcagctacgacgaggtgtgggaggtccgcgaccgg
atgccggtgttcccggtgcccgacggcgaggaccagaactcctggttgcggcacgaggtg
gaccggggcctgcaacggcggttcccggacggcgtttcggacgagtaccgcgctcgggct
gccttcgagctcgacgtcatcaagcagaagggatttccctcctacttcctcatcgtcggc
gacttgatcgcctacgcgcgcagcgtggggatccgagtcggaccaggccgaggctcggcg
gcgggctcgctggtctcgtacgcgctggggatcacgaacctcgacccgatcaagcacggc
ttgctgttcgagcgcttcctcaaccccgagcggccttctgcccctgacatcgatatcgac
ttcgacgaccgcagacgcggcgagatgatccggtacgcgagcgagaaatggggcgcggac
cgcgtggcgcaggtcatcaccttcggcacgatcaaaacgaaagccgcgctcaaggactcc
gcccgtgtgctgcacggccagcccggcttcgccatcgccgatcggatcaccaaggcgctg
ccccccgccatcatggccaaggacatcccgctgtcggggatcaccaacccggagcacgag
cgctacaaagaggccaccgagatccgcgagctcatcgcgaacgaccctgatgtcgcgaag
atctacgaaaccgcgctttcgctcgaggggctgatccgcaacgcgggggtgcacgcctgc
gcgatcatcatgtccaacgagccgttgatcgaaacgatcccgctgtggaaacgcccacag
gacggggcgatcatcacgggctgggactacccctcgtgcgaggacatcggcctgttgaag
atggacttcctcggcctgcgcaacctcacggtcatcggggacgccatcgagaacatccgc
cagaaccggggcgtggaactggatttggagaacgcgccgctcgacgaccccgcgacgttc
gccctcctgtcccgcggtgagaccttgggcgtgttccaactcgacggcggcccgatgcgc
gaccttcttcgccggatgaaaccgaccggattcggcgacatcgtcgccgtgttgtcgctg
taccggcccggtcccatgggggtgaacgcccacaacgattacgcggaccgcaaaaacggg
cgccaacagatcaagccgatccatcctgagctggaagagccgctcaaggagatcctctcc
gagacgtacggcctgatcgtctaccaagagcagatcatgttcatcgcgcaaaaggtcgcg
ggctattcgatgggcaaagccgacgcgctgcgcaaagcgatgggcaaaaagaagctcgaa
gtgctccaggccgagtacgaaggcttctcccagggcatgcgcgggaacgggttctccgag
gccgctgtcaaagcgctctgggacacagtgctccccttcgccgactacgcgttcaacaag
tcgcatgccgcctgttacgcgctggtcgcgtactggaccggttacctcaaggccaattat
ccggccgagtacatggccgcgcttctcacctcggtgggcgacgacaaggacaaagcggcc
gtgtatctcgctgattgccgcaaaatgggcatcacggtgctcgcccccgacgtgaacaag
tcgcgagtggacttcgccgcggtcggcgaagacatccttttcggcctctctggcgtgcgc
aacgtgggcgtcggtctggtggagtcgatcatccgcacccgcgagtccgaaggcgcgttc
acgagtttctcggactatctcgcgaaagccgacatcacggcctgcaacaagaaagccgtg
gagtcgctcatcaaggcgggcggcttcgacgcgctcggccatccccgaaaagggctctac
cttgtgcacaccgaggccgtggacgctgtgatgtccacgaagaaagccgaggcgcaaggc
caatacgatttgttctccgactttttcgaatcaggttcgccggagctgacggccacgttc
gaggtccagatccctgacgaagaatgggatatgaagcaaaagctcgcgctggagcgcgaa
atgctgggcctgtatgtctccgggcatccgctcgcgggcctggagcaggcgctcgccgcc
gcgaccgacgtgtcgatccgttcgattctcgacggcgaggtgaaggacgggacgaatgtg
aaggtcggcggggtgctttccggcgtgaaccgccgggtgaacaaaaacggggccccgtac
gcgagcgcccagctcgaagacctggtcgggggtatcgaggtcttcctgttcccgcagaat
tacgtggcctacggcgaggagttcgtcgaggacgcggtcgtgctcatcaatgctcgggtg
aacttccgcgacgaccggatcgcgctcatcgcgagcgatgtgcgccaagctgagctgacc
ccgcagaaagccgcgaacacccttcggctctcggtcgccgagagctggtgcaaccctgat
tcggtggcccaactgcgggagatactcgaacgcaaccctggccccacacaggtgcttctc
gacttgcaccgcggcggcaaagcgttgtcgttccaattggacgaggcgctcacggtgatg
ccgtccccggagctgtacggcgacctcaaagccttgatcgggcctggctgccttggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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