KEGG   Streptomyces reticuli: TUE45_04782
Entry
TUE45_04782       CDS       T04246                                 
Symbol
pdg_1
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
srw  Streptomyces reticuli
Pathway
srw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    TUE45_04782 (pdg_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srw03400]
    TUE45_04782 (pdg_1)
Enzymes [BR:srw01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TUE45_04782 (pdg_1)
DNA repair and recombination proteins [BR:srw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     TUE45_04782 (pdg_1)
 Prokaryotic type
     TUE45_04782 (pdg_1)
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH
Other DBs
NCBI-ProteinID: CUW30065
Position
I:5409217..5409918
AA seq 233 aa
MKKSSGAAKKAAGVTKKAAAAQKKAPAAKKTAAAKKAPALVKKTAAAAKKTPAAVKKAAS
VEKPAKKAAPVQKIAVRPPAGESPTALVRRARRINRELAEVYPYAHPELDFENPFQLLVA
TVLSAQTTDLRVNQTTPGLFAKYPTPEDLAAANPEEVEEILRPCGFFRAKTKSVIGLSKA
LVENFGGEVPGKLEELVTLPGVGRKTAFVVLGNAFGFHRSGLRSEHAPDLCIP
NT seq 702 nt   +upstreamnt  +downstreamnt
gtgaagaagtcttccggtgcggcgaagaaggccgccggcgtgacgaagaaggccgcggct
gcgcagaagaaggctccggcggcgaagaagaccgcggcggccaagaaggctcccgccctc
gtgaagaagaccgccgccgcggcgaagaagacccccgccgccgtgaagaaggccgcgtcc
gtcgagaagcccgccaagaaggccgcgcccgtccagaagatcgccgtcaggccgccggcc
ggcgagtcacccaccgccctggtccgccgcgcccgccgcatcaaccgcgagctggccgag
gtgtacccgtacgcccacccggaactggacttcgagaaccccttccagctgctggtcgcc
accgtgctgtcggcccagacgaccgacctgcgcgtcaaccagaccaccccggggctgttc
gccaagtaccccacccccgaggacctcgccgccgccaacccggaggaggtcgaggagatc
ctgcgcccctgcggcttcttccgggccaagaccaagtcggtcatagggctctccaaggcg
ctcgtcgagaacttcggcggcgaggtgcccgggaagctggaggagctggtcacactgccc
ggcgtgggccgcaagaccgccttcgtcgtcctcggcaacgccttcgggtttcaccgttcg
ggactacggtccgaacatgcccctgacctgtgcattccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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