KEGG   Sinocyclocheilus rhinocerous: 107705951
Entry
107705951         CDS       T04916                                 
Name
(RefSeq) nucleoporin NUP188 homolog
  KO
K14311  nuclear pore complex protein Nup188
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107705951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107705951
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107705951
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N Nup188_SH3-like
Other DBs
NCBI-GeneID: 107705951
NCBI-ProteinID: XP_016364972
Position
Unknown
AA seq 1441 aa
MADSEMCVRSSRELWTILLGRSALREPAQIEAELDRNWKRLLQGLSFYKPPSTSAADKLK
ADKDTPQALKDFGLRISKLLGLDEQQSVQILQCYLQEDYRATRNTLKAVLQDERQSQALL
LKIADYYYEERLCVLRCVLHLLTYFQDERHPYSAEYSNCVSKLEKDLVSNYRQQFESLSK
SEAPTWETHGNLMTERHVSHWFVQCLKEQALLLEILFLYYAYFEMPPNELCTFTRLFKEQ
GFGQRQTNRHLVGKSMDVLVERIGYFSSLILVEGMDIDFLHKCALEDRTEQHQFYDQQDI
CKEVDQMLLTFGDISHHGPVLLAWILLRHTLRPEEVSSVIRRLGNTTLQLGVFQYLTNML
QALGSTGNNCTASTARMCIYGLLSFVITSFEEETLGSQQHLINAACEVLAAPSLAELFWE
SKPNMGLGVILDSAVGVFPYKTGPLLQLLTALLSDKSTAKKVYTFLDKMSFYTEAYKHKP
NDVISREDGTLWRRQTPKLLYPLGVGQTNLRMPQGCFGLVCEGKQLSVGEQGFLVRWEYS
YSSWTLFTCEIEMLLHVVSTADVLAHCERVKPILDLVHKIISTDWTVSDCLLPLTSRIYM
LLQRLTSVINPPVDVITSCVNCLIALAARQPGKVWSSLHHTGFLPFAATPLTNMAQTISA
EGMKAGNYGNLLVLIEQPRGEYSVTVAFLRLVTTLVKGQLGSTQSRGLIPCVLLVLKEML
PTYHKWRYNTYGVRERIGCLILELVHAILNLSQEGESEGSAPSLQSLCIYSLANTEAGQA
VVNIMGVGVDTINMVLAAQPSSGGSEGPGQVLIQTVKLAFSVTNNVIRLKPQSDTASPLE
QALTQHGGHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSEAAAIR
DAFLTRLQSRTEDMRIKVTILEFLTVAVETQPGLIELFLNLETKDGSDGAKEFSLGEWSC
LSVVLELLDSKQQGKYWCPPLLHRAALAFLHALWQDRRDSALSVLRTKEKFWENLTTPLF
GNLPPPSETTEPCVLESCAFVMKIIALEIYYVVSGVLDPCLKAALENFSSKRRYEFWSDY
VRDLVCVACGGEEEGLRSLSESQMLISAWRTLLILSTSHSEVMHLKDDTVRQKLFMDVLE
GTKAALLMSQSVFCLRLGSMMVTLLLILLKQWKSVLVSAPALLPPLSLMMESVLHAEQQL
TDRTKAKLLSALILALQIQGLNGGEITQLPQLLLCVCEMVQDEALALIDSTRHTIQRGDV
QEDSMETDSPHFQKDQQDSVCVLALHLSKELCRADEDGEQWLQVVRKLPVLPSVLSALEL
SLRSKQNLYFTEAALHLLLTLTRTPQGAAAVAGAGVIQSICLPLLSVYEGPSNGATQAFV
RKSQDAPSWPGVYRLSLSLMESLLKTVRYNFINEALDFVGVHQERILQVMNAVGFVNEKL
S
NT seq 4326 nt   +upstreamnt  +downstreamnt
atggcggactcggagatgtgtgtcaggagcagccgagagttatggactatcttgctgggc
agatctgcacttcgagaaccggcccaaattgaagctgaattggatcggaactggaagaga
cttctgcagggtctgtccttctataagccacccagcacatcggccgcagacaagctgaaa
gcagataaagacacaccacaagctctgaaagatttcggactcaggatcagcaaactgctg
ggtttggatgaacagcaaagcgtgcagattcttcagtgttacctccaggaggactacagg
gccacacgaaacacactcaaggctgtgctgcaggatgagagacagagtcaagctctgctg
ctgaagatagcagattactattatgaagagagactgtgcgttctacgctgcgttcttcac
ctcctcacgtacttccaggatgagagacatccatacagtgcagagtactccaactgtgtt
agtaaactggagaaagatctggtgtccaactacaggcagcagtttgagtcgctgtccaaa
tcagaagctccaacatgggagacacatggaaacctgatgacggagaggcatgtgtcccac
tggtttgtgcagtgtttgaaggaacaggccctgctgctggagatcttgttcctgtactat
gcatactttgagatgccgcccaatgaactttgcaccttcacacggctgtttaaggagcag
ggctttggacagcggcagaccaatcgacacctcgtgggcaagagcatggatgtgctggtt
gaacgcattggctatttcagttctttaattcttgtggaggggatggatatcgactttctg
cataaatgtgctctggaagaccgaaccgaacagcatcagttttatgaccaacaggatatt
tgcaaggaggtggatcagatgctgttgacatttggtgacatttctcaccacgggccagtt
ctgttggcctggattctgctgcgacacacactgcgtccggaggaagtgagctctgtgatc
agacgtctaggaaacacgacgctacagctcggagtctttcagtatctcaccaacatgctg
caggcactcggcagcactggaaataactgtacagcgagcactgcgcggatgtgtatttat
ggtctcctgtcttttgtcatcacctcttttgaagaagagacactcggcagccaacagcat
ctgatcaatgcagcatgtgaagttcttgctgctccgagtctggctgagcttttttgggag
tcgaagccgaacatggggctcggtgtgattctggacagtgcagtgggtgtgtttccatac
aagactggtcctttactacagctgctcaccgcactgctgtctgacaaatctacagctaag
aaggtgtataccttcttagataagatgtcattctacacagaggcctataagcacaaaccc
aacgacgtgatctccagagaggatggcactctgtggaggagacagactcccaaactcctc
tatcctctgggtgtaggtcagaccaacctgcgaatgcctcagggatgtttcggactggtg
tgtgaaggaaagcagctgtctgtgggtgaacagggtttcctggtgcgctgggagtattcc
tacagctcatggactctcttcacctgtgagattgagatgctgctgcacgtcgtctctact
gcagatgtgttggcacactgtgagcgagtgaagcccatcttggatctggttcataagatc
atcagcaccgattggacggtttctgactgtctgctgccactcacatcgcggatctacatg
ctgctacagaggttgacctccgttattaaccctccagtagatgtgattacttcctgcgtc
aactgccttatcgctctagctgctcggcagcctgggaaggtttggtccagtctgcatcac
accggcttccttccatttgccgccacccctctgactaacatggcacagaccatcagtgca
gagggcatgaaggcgggtaactatggcaacctgctggtgttgatcgaacagcccagagga
gagtacagtgtgaccgttgcctttttaagactggtgaccacactcgtcaagggtcagttg
ggcagtactcagagcagaggactcatcccgtgtgtgctgctggttctgaaagaaatgctg
cctacgtatcataaatggcgctacaacacctatggagtgcgagagaggatcggttgtttg
attctagagctggttcatgctattctcaatctgagtcaggagggggagtcagagggcagc
gcccccagtctgcagtcgttgtgtatctacagtctggccaacacagaggcaggacaggcg
gtggtcaacatcatgggtgtaggagtggacactatcaacatggtgctcgcagcacagcct
agcagtggtggttctgagggacctggtcaggttctgatccagacagtgaagttggcgttc
tcagtcaccaacaacgtgatccgactcaaaccgcagtctgatacagcctcacctctggag
caagcgctaacacagcacggtggtcacggcaacaacctgatcgctgtgctggcgaagtat
atttaccacaagcacgacccagcgctgccgcgacttgccatacagctgctgaagagactc
gccacggtggctcccatgtccgtttatgcttgcctgggcagtgaagccgctgcgatcaga
gatgcgtttctgacacgactgcagagcagaactgaagacatgcgtattaaagtcaccata
ctcgagttcctcaccgtggctgtggaaacgcaacctggactcattgagctcttcctcaac
cttgagaccaaagacggcagcgacggtgcaaaggagttttctctgggagagtggagctgt
ttgtcagtggtgttggagttgttggattctaagcagcaggggaagtactggtgtcctcca
ctcctgcacagggcagcactggccttcctccacgcgctctggcaggacagacgggacagc
gctctctctgtgctcaggaccaaagaaaaattctgggagaacctcacaactcctttattt
ggaaacttacctcccccatctgagacaaccgagccgtgtgttctggagtcttgtgccttt
gtgatgaagataatcgctcttgagatctactatgttgtcagtggtgtgttggatccgtgt
ctgaaagcggctctggagaatttcagcagtaagcgccgctatgagttctggtcggattac
gtgcgtgatctggtgtgtgtggcgtgtggcggtgaagaggagggtctgcgctctctgtct
gagtctcagatgctcatctcagcctggaggacactcttaatactctccaccagtcattct
gaggtgatgcatctgaaggatgacactgtcaggcagaagcttttcatggacgtgttggaa
gggaccaaagcagcgctgctgatgtctcagtctgtcttctgtctgcgtctgggatccatg
atggtcacgctgctcctcatcctcctcaaacagtggaaaagtgtgttggtgtccgctcca
gctcttctgccgcccctgtctctgatgatggaaagcgttctgcatgctgaacaacagctc
acggaccgaaccaaagccaaactcctgtcagctctcatcttagccctgcagatacaagga
ctgaatggaggagagattacccagcttccccagctgctgttgtgcgtgtgtgagatggtt
caggacgaagccctggcattgattgacagcacacgtcacacgatacagagaggtgatgtt
caggaggacagcatggagacagacagcccgcatttccagaaagaccagcaagactcagtg
tgtgtgttagctcttcatctctctaaagagttgtgtcgggctgatgaggatggtgagcag
tggctgcaggtggtcaggaagctgccagttctgccgtcggttctcagcgctctggagctt
agcctgcgttccaaacagaacctttacttcacagaggcagcgcttcatctgctgctcacc
ctcacgagaaccccgcagggggcagcagcggtggcaggtgccggagtgattcagagcatc
tgtcttcctctcctcagtgtgtatgagggaccatctaatggagccacgcaggcgtttgtg
cgtaagtctcaggacgcccccagctggccgggtgtgtacagattgagtctgtctctgatg
gaaagtctgctgaaaactgtccgttacaacttcattaatgaagcgctcgactttgttggc
gtccaccaggagcgcatcctgcaggttatgaacgcagtaggttttgtaaatgaaaaattg
agttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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