KEGG   Sinocyclocheilus rhinocerous: 107731936
Entry
107731936         CDS       T04916                                 
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107731936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:srx03021]
    107731936
   03036 Chromosome and associated proteins [BR:srx03036]
    107731936
Transcription machinery [BR:srx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107731936
   Coactivators
    SAGA/TFTC/STAGA complex
     107731936
Chromosome and associated proteins [BR:srx03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107731936
    STAGA complex
     107731936
    TFTC complex
     107731936
    SAGA complex
     107731936
    SLIK complex
     107731936
SSDB
Motif
Pfam: TAF6_C TAF CENP-S
Other DBs
NCBI-GeneID: 107731936
NCBI-ProteinID: XP_016398642
Position
Unknown
AA seq 641 aa
MTEREERRFAEVPRESIKLMAESTGVELSEEVATLLAEDVCYRLREATQNSSQFMRHAKR
RKLSVEDFNRALRWSNTETVCGYGAQDALPFRPLKEGELFFVEDREINLVELALATNIPK
GCAETMVRVHVSYLDGKGNLEPQGTVPTAVQSLSEDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLTLAAEGGCAGLPGTATGAVGFRENSLGLSPPPEPLSEPPLGIA
SHLQAGGAGCPWEEWTPVSLPAMYCELYSFFGDSLAVRFSTGPPLGGAPPSGSCQPLEGR
KEPASGAPNLENTRKMPQLTASMNISPRQDGSPRMEPQPPSLAATVPGRSLARSSSSSSS
VSRSRSSSSRPGRSTSQSRDIFPKARFPLPQAGPPAFSFIIGGRQMGRRCQGRRFQTSFT
PTPPHTTLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLHLPL
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgacagagcgggaggaacggcgcttcgctgaggtgccgcgggaatcaattaaactgatg
gccgaaagcaccggagtggagctcagcgaggaggtggcaactctgctggcggaggatgtg
tgctaccgcctcagagaggcaacccagaacagctcacagttcatgagacatgcaaagaga
aggaagctgagtgtggaagacttcaatagagcactacggtggagcaatactgagactgtt
tgcggctatggtgcgcaagacgccttaccattccgtccattaaaggaaggagagcttttc
tttgtagaggatcgggagataaatctggtggagttggcacttgctactaacattcccaaa
ggctgtgcagagacgatggttcgagtgcatgtgtcatatcttgatggaaaaggcaatctg
gaacctcaagggacagtgcccactgctgttcagtctctatcagaggatctgctgaagtat
taccaacaaataacgcgagccattttaggagaggacccacatctgatgaaggtggctttg
ctagacctccagtccaattcaaagatcgctgccctcctgccttacttcgtttacgtcatc
agtggggtgaagtcagtaagtcatgatctggaccagttaaacagactcctacacatggtg
aagagtttggtgcagaacccgtacctgtacctgggctcatatgtgcgcagtcttgtgtcc
agtgtcatgtactgcatcctggagcctctggctgcttccatcaaccccctcaatgaccac
tggaccctgagagactatgcagcccttctgctcagccacatcttctggacacatggtgat
cttgtgagtgggctgtaccatcagattcttctgtctctgcagaaggttctttccgatccg
gttagacctctctgttcccactatggagcagtagtgggtctgcatgctctcggctggaag
gctgttgaacgtgtgctgtatcctcacctccctgcctattgggcgaatctacaagctgtg
ctagatgattactctgtgtccaacgctcaggtgaaagcagatggccacaaagtctatgga
gccattctggtggcggtagagcgtttgctgaagatgaaggcactcagtctgaccttggca
gcagaaggaggctgtgctggtctaccaggcactgccacaggggctgtcggcttcagagaa
aactcacttggcctcagcccgcctcccgaacctctttccgaaccccctcttggcattgca
agccatctccaagcaggtggagctggctgtccatgggaggagtggactcctgtatctctt
cctgccatgtactgtgaactctactccttttttggagacagtctggctgtacgcttcagc
actggcccgccactaggtggtgccccaccttcaggttcctgccaaccactagagggcagg
aaagagccagcgagtggtgcccccaatcttgagaatacacgaaaaatgccccagctaact
gccagtatgaatattagcccaagacaagatggaagccctcgtatggaaccacaaccacca
agtctggctgctaccgtcccagggagatctcttgcccgctcttcatcctcctcatcttcc
gtctcacgttccaggtcatcttcgtcacgtcctggacgttcaaccagccaatcccgagac
attttccctaaagcccgcttcccgctgcctcaggctggacctcctgctttctcattcatc
attggcgggcggcagatggggcgacgctgtcagggaaggcgcttccagacaagctttact
ccaactccacctcatactaccctcccacctcgtgcttacgcccacaagctgccggtcata
gggagagtgagcaaacctgtgcgccgctggacatgttcccattactctcttcacctgcct
ctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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