KEGG   Sinocyclocheilus rhinocerous: 107739712
Entry
107739712         CDS       T04916                                 
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA pseudouridine synthase A, mitochondrial-like
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
srx  Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:srx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srx03016]
    107739712
Enzymes [BR:srx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     107739712
Transfer RNA biogenesis [BR:srx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    107739712
 Prokaryotic type
    107739712
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 107739712
NCBI-ProteinID: XP_016407403
Position
Unknown
AA seq 413 aa
MLRCCRIIHIVSSHTFIPALKNKGWPDPKLKFRGFCMSSKMTEDSSDAQIKALKRPADDT
HAETEYEDKKLKTDQDERKYPKKKVALLMAYSGKGYYGMQRNAKNSQFRTIEDELVTALV
RAGCIPEGHGDDMKKMSFQRCARTDKIFNSVSXQHXWKSVHHVHVHNLNVFKLAGYKRVT
GGFNSKNNCDARTYSYMLPTVSFFPKDYNQEDTSFRLSSETLQKVNRLFGLYKGTHNFHN
FTSQKGPRDPSAKRYITHMSCGEPFVRQEAEFAVITVRGQSFMMHQIRKMIGLVIAVVKG
YVDERVIERSWGEDKVDVPKAPGLGLVLERVHFDRYNKRFGGDGIHETLEWTEEEEAIAA
FKDKHIYPSIVETELHEKSMVNWMATLYIHDFEATATGNQERKDDDEDGNVSD
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgctgaggtgctgtcggatcattcatattgtatcaagtcacacatttattccagctctc
aaaaacaaagggtggccggatcctaaattaaagttccgtggattttgcatgtccagcaag
atgactgaggattcatcagacgcccaaatcaaagcgttgaaaagaccagcagatgatacg
cacgctgaaactgagtatgaagacaagaagcttaaaacagaccaggatgaaaggaaatac
cccaagaaaaaggtggccctgctgatggcttattcaggcaaagggtattatggaatgcag
agaaatgcaaagaactctcagttcagaaccattgaggatgaactggtcactgctcttgtg
agagccggatgtattccagagggccatggagatgacatgaagaagatgtctttccagcgg
tgtgcacgaacagataagatttttaatagtgttagttaacaacactgatggaaatctgta
catcatgtacatgtacataatttaaatgttttcaaacttgcaggttacaagagggtcaca
ggtggcttcaattccaaaaacaactgtgacgccagaacgtattcctacatgcttcccacg
gtgtctttcttcccaaaggactataaccaggaggacacgtcattccgtctgagttcagag
acccttcagaaggtcaaccgcttatttggcctgtataaaggcacccacaacttccacaac
ttcacatcccaaaaaggtcctcgggaccccagcgccaagcgctatatcacccacatgtcc
tgtggagagccgtttgtgagacaggaagctgagtttgccgtcatcacagtaagaggccag
agcttcatgatgcaccagatccggaagatgatcggtcttgtgatcgctgtggtcaaagga
tatgtggatgaaagagtgatcgagaggagctggggagaggacaaagttgacgttcccaag
gctcctgggctcgggttagtgctggagagggtgcactttgaccgatacaacaaacgcttc
ggaggagatggcatccatgagactctggaatggactgaggaagaagaagccattgctgct
tttaaggacaagcacatttatcccagtattgtggagactgagctccatgagaagtccatg
gtaaactggatggctactctatatatccatgattttgaagcaacggccacaggaaaccaa
gagcgcaaagatgatgatgaagatggaaacgtatctgactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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