KEGG   Sinocyclocheilus rhinocerous: 107756798
Entry
107756798         CDS       T04916                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107756798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107756798
Enzymes [BR:srx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     107756798
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107756798
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     107756798
SSDB
Motif
Pfam: Exo_endo_phos LRR_4 LRR_8 LRR_1 type_II_gspD_N0 LRR_6
Other DBs
NCBI-GeneID: 107756798
NCBI-ProteinID: XP_016429554
UniProt: A0A673M7F1
Position
Unknown
AA seq 557 aa
MPKEKYDPPDPRRMYTIMSSEEAANGKKSYWAELEIVGKVRSLSSALWSLTHLTALHISD
NSLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNLVNLRELLLNNNQLRVLPFELGKLF
QLQTLSLKGNPLAQEILNLYQEPDGTRRLLNYLLDNLAGTKRVPIEQPPPRSWIPLQEHD
RTRPAALFSVMCYNVLCDKYATRQLYGYCPSWALHWDYRKKSIMQEILNCSADIISLQEV
ETEQYYNYFLVELKEHGYEGFFSPKSRARTMSESDRKHVDGCAVFYKTEKFSLVQKHTVE
FNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKEMMEHSAGKPLHGMEKQLLLVANAH
MHWDPEYSDVKLVQTMMFLSEVKNIVDKATRSLKLSSISGETNAIPLVLCADLNSLPESG
VVEYLSTGGVDSTHKDFKELRYIDSLTNFNCNGKNGTSSTRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSQPLLNVLGVLGPLDPHWLHENNVTGCPHPHIPSDHFSLFAQLEL
LLPYLPAVNGIHLPGRR
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgcccaaggaaaaatatgacccgcctgacccaaggcggatgtacacaataatgtccagt
gaggaggcggccaatgggaagaagtcatattgggcagagctggagattgttggaaaagtg
aggagtttaagttcagcattatggtcccttacccacctcactgctcttcatatcagtgat
aactcactttcgcgaatcccacccgacattgccaaactacacaacttggtgtacctggac
ctctcgtccaataagatcaggagcctgcccgccgagctaggcaacttggttaatctcagg
gaactgcttttaaataacaaccagttacgagttctgccttttgagcttggaaaactcttt
cagttacaaacgttgagtttgaaaggaaacccacttgcacaagaaatcttgaacctctac
caagagcctgatgggacacgtcggctactcaactacctgctggacaatcttgcaggcacc
aaacgtgtacctatagaacagccaccacctcgctcatggataccactgcaggagcacgac
agaacacggccagcagcacttttctctgtaatgtgctacaatgtgctgtgtgacaagtac
gccacacgccagctctacggctactgtccctcttgggccctccactgggactacaggaag
aagtccatcatgcaggagattctcaactgcagtgcggatatcatcagcctacaggaagtg
gaaacggagcagtactacaactatttcctggtggagctgaaggaacatggttatgaagga
ttcttcagtcctaagtcccgagccaggaccatgtctgaatccgaccgcaaacatgtggac
ggctgcgcagtcttctataaaacagagaagttcagtctggtgcagaaacacacagtggag
tttaaccagctggctatggcaaattcagaaggttcagaggccatgttgaacagggtgatg
acaaaggacaacatcggagtcgctgtactactagagctgcggaaagagatgatggagcat
tctgctggaaagcctctgcatggcatggagaaacagctcctccttgtggccaatgctcat
atgcactgggaccccgagtactcggatgttaagcttgtccagaccatgatgtttctgtct
gaagtgaagaacattgtggataaagccactcgcagtctcaagctctcctccatctcagga
gaaaccaatgccatccctctcgtcctgtgcgctgacctcaactctctacctgagtcgggt
gtggtggagtacctgagcacaggtggtgtggacagcacccacaaggacttcaaagagctg
cgatatattgacagcttgaccaacttcaactgcaacggcaagaacggcacctccagcacc
aggatcacgcacggcttcaagctgaagagtgcctatgagaacggcctgatgccttacacc
aactacacgtttgactttaagggcatcattgactacatcttctactctcaacctttgctt
aacgtgctgggcgtgcttggtcccttggacccccactggctccacgagaacaatgtcact
ggctgcccccatccccacatcccctctgatcacttctcactgtttgcacaactggagctg
ctcctgccctatctgcctgctgtcaacggcattcatctgcctggtcgcaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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